Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0241 ATGTTGATGACCTACCACATGAACTCCTGTTATCAAATTCTCCACTTCTTTAAAAAATTTGAAGAGGAAATTGTGAAGCAGGAATTGAAGGCCATGGCGTGGAAGAAATTTGGTTACAAGACTGTGATTGTGTTTCTAGTTTTAGTCGTGAATGTGAGCTATCATGCAGATGCGGCCAAGAATGGGAGTTTAGGAGCTTCTTTCATATTTGGGGACTCATTGGTGGACGCTGGAAACAACAACTATCTGTCAACGCTGTCAAGGGCAAACATGACACCCAACGGAATTGATTTTAAGGCCTCCGGAGGAAACCCCACCGGCCGCTTCACCAACGGACGAACCATTGCTGATATCGTTGGAGAGAAACTGGGGCAACCAAATTATGCTGTGCCGTTCTTGGCCCCAAACGCAACTGGCAAAGCTATACTATACGGAGTGAATTACGCTTCTGGAGGAGGAGGCATTCTGAATGATACAGGAAGAATATTTGTGAATAGGCTGGGAATGGATGTTCAGGTAGACTACTTCAACATAACAAGGAAAGAGATAGATAAGTTGCTGGGGAAATCAAGGGCGAGGGAGTTCATAATGAAGGAATCCATGTTCTCCATCACGGTGGGATCAAATGATTTTCTCAACAATTATCTTCTCCCTTTGGTCTCCATTGGAGCGAGAATTTCTGAAAGCCCAGATGCTTTCGTCGACGATATGATTAATCACTTCAGGACCCAACTCACTAGACTTTACCAGCTTGATGCTCGGAGATTTGTGGTGGCCAACGTTGGTCCGATAGGGTGCATACCTTACCAGAAGACCATAAATCGGCTGGATGAAAATGAGTGCACGGATTTGGCAAACAAACTTGCAGTTCAATATAATGGTCGATTAAAGGATTTGCTTGCCGAACTAAATGACAACCTCCCCGGAGCCACGTTCGTGGTTGCCAACGTGTACGATCTGGTGATGGAACTCATAAAAAATTACGACAAATACGGATTTAGAACAGCAAGCGTAGCGTGCTGTGGAAATGGAGGGCAGTACGCAGGGATAATTCCATGTGGGCCGACGTCGAGCTTGTGCACGGACAGGTACAAGCACGTGTTCTGGGATCCATACCATCCAAGTGAAGCTGCCAACGAAATACTAGCCGAACAGCTGGTTGACGGAGACACCAGATTCATTTCTCCCATGAATCTTCGCCAGCTTCGAGACCTTTAG 1218 0.4581 MLMTYHMNSCYQILHFFKKFEEEIVKQELKAMAWKKFGYKTVIVFLVLVVNVSYHADAAKNGSLGASFIFGDSLVDAGNNNYLSTLSRANMTPNGIDFKASGGNPTGRFTNGRTIADIVGEKLGQPNYAVPFLAPNATGKAILYGVNYASGGGGILNDTGRIFVNRLGMDVQVDYFNITRKEIDKLLGKSRAREFIMKESMFSITVGSNDFLNNYLLPLVSIGARISESPDAFVDDMINHFRTQLTRLYQLDARRFVVANVGPIGCIPYQKTINRLDENECTDLANKLAVQYNGRLKDLLAELNDNLPGATFVVANVYDLVMELIKNYDKYGFRTASVACCGNGGQYAGIIPCGPTSSLCTDRYKHVFWDPYHPSEAANEILAEQLVDGDTRFISPMNLRQLRDL 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0241 405 CDD SGNH_plant_lipase_like 66 390 IPR035669 -
Lele50g0241 405 Gene3D SGNH hydrolase 53 389 IPR036514 -
Lele50g0241 405 Pfam GDSL-like Lipase/Acylhydrolase 68 386 IPR001087 GO:0016788
Lele50g0241 405 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 66 402 - -
Lele50g0241 405 SUPERFAMILY SGNH hydrolase 70 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0241 Lele-ChrLele50 1434918 1436675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0241 66 402 Acyl Lipid Metabolism Gene Families AT4G10950 34.615 2.21e-65 212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0241 50 1434918 1436675 Lele51g0244 51 1384964 1386504 hybridization
Lele50g0241 50 1434918 1436675 Lele52g0245 52 1452905 1454677 hybridization