Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0228 ATGATGAATACAGAAGGTTGCGAGAAGCCAGTCGATACTCGTTATTGGGTCCCATTGTTGGTGGAGGCTTGCAAGAACAAAGATCCATTGCAACATTCTTCTAACTGCAATCAGAGCGATAAATTCTTCCCCAGTTTCTGCATTACCTGCTCACAACTATTCTGCAAATTCTGCCCTAAAGGAACCAACCGCCCACATGATCACCACACAGTACTCCCAGTTTACAAAGGTTCTCGCGATAACTGTTTGCACGAAAGTCAGGTGTCCAAGTTCATTGATATATCAGACATAGACCTATACTCTATTAATCATAAACAAGTAGTTTTCATTAACAGAAGACATTGTGAACAACCCAAGTCTCGGACTAATAAATCTGGCTACGCGTGCAACATCTGTGGAAGAGAACTCATTAGAGAAACTAAGTTCTGCTCAGTCCAGTGCAAGATCGAAAGCGGTAAGGATTTAGAGCTGAAACTGAAACGGAAAGCCGAAGAAGGAGAAGAGCCTGCCGCCTTAAAGCCTCAGTCTTATCGGAAAAGGAGCAGAAAAGGGGTGCCCACCCGGTCCATCTTAATCAGTCCTTTGACTCCTCCTTTCCACTAA 603 0.4395 MMNTEGCEKPVDTRYWVPLLVEACKNKDPLQHSSNCNQSDKFFPSFCITCSQLFCKFCPKGTNRPHDHHTVLPVYKGSRDNCLHESQVSKFIDISDIDLYSINHKQVVFINRRHCEQPKSRTNKSGYACNICGRELIRETKFCSVQCKIESGKDLELKLKRKAEEGEEPAALKPQSYRKRSRKGVPTRSILISPLTPPFH 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0228 200 ProSiteProfiles Zinc finger B-box type profile. 31 74 IPR000315 GO:0008270
Lele50g0228 200 SUPERFAMILY B-box zinc-binding domain 33 74 - -
Lele50g0228 200 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 16 176 - -
Lele50g0228 200 MobiDBLite consensus disorder prediction 163 200 - -
Lele50g0228 200 Pfam PLATZ transcription factor 79 149 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0228 Lele-ChrLele50 1360886 1361677 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lele50g0228 PLATZ 9.6e-15 No_clan