Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0220 ATGGCGGATATTAAGCTTACCAGGGTAGATCAAGGCCAAACGAAGATTAAAAATGTTCCAATAGCCGTGACCCCAGAAGGTTTTTGGTGTTGTCCCTCTCCTGTCGTATTTCAGAAAAGCCTCAAAACTCAAAACTCTCTGAATAAACCTCAACCCTCCTCACCACCACCCAAAACCAGTGCTCAGAAGAAGACAGTCACGGGAAGTGAGAGAAGACAAGCACCTGCCCCATCAAGATTGGCTATGTCCGATGATCAACAATGTACTGGTTCTGAAAGACCTCCATCTGGCACACCTGTGGCCACAGAGAGAGCACCGAGACCCAAAGTGGAAAGTTTGCCAAGAAAGGTAGCTATTGAGTTTGGTGAGGATGGAACTAGTGATACAAAGGTCGTTTTGTTTGGAAAGCAGGGGTTCTGTGTGAAGTTAAGTGTCCACAAGGATGTTCTAACTGAGAAGAGCAGCTTCTTTGCCGAGAAACTTTCTGAACAATCTGGTTTGCCAAGTATTCAAATTAATGATTGTGAGGATGTTGAAATATATGTTGAAACTGTTGGACTGATGTACTGCAAAGATATGAAGCAGAGGCTGATGAAGCAAAGTGTTTCTCGAACACTTAGAATACTCAAGGTTGCAGAATTCCTTGGCTTCAGCTCATGCATCCAGTCATGTTTGGAGTACTTGGAGGCAGTCCCTTGGGTTGGAGAAGAAGAAGAAAGGGTTGTCTCAACAGTTCTGAGACTCCAAGGAGAAGGCATTGGGATCAACCCTGTGTTGAAACGAGTTTCTTCTGACATCTCTAATGTCCCTAAAGATACTCTTTGCCATATTATTGAACTCGTTCTCAAGAGCAACGAGGAGAGAGGTCGCCGAGAGATGAAATCTGTAGTGCTGAAGCTCCTTAGGGAGAATAACAGTACTCCAAGCCATGCAGGTTCAGTTGACATCTGTATTGACACAATACATAAATCATGCAGAAGCTGCTTGGATTCTCTGTTGTCTTTATTCCAGCAGGCTGCAGAACCAGACTTTGCAAATAAACCCAGCGATCACAGGGAACCCATAGCAAAGCGCATAGCTCTTGAAGCTGATAACGTGTCGTGGTTGGCTGAGATATTAATTGACAAACAAGCAGCCGATGAATTTGCAGTGATGTGGGCAAGCCAGCAGGAATTGGCTGTCCTACATGGAAAGCTGCCTGTCGTATGTCGTTACCACATTAGCTGCATTTCAGGAAAACTCTATGTTGGTATTGGAAGAGGGGAATTGTTGCCATCAAAGGAGACACGTCAGCTGTTGTTACAGACATGGCTACAGCCTTTAATGGATGACTACAGCTGGTTGCACCATGCATGCCGGTCGTTTGATAGGAAAGCCGTGGAGGAAGGAATTGGGAGAACAATCCTCACTCTGCCTATGGAGGATCAACAGAGTATTCTTCTATCATGGTTGGGAAGTTTCTTGAAAGGAGGTGATAACTGCCCTAATCTTCAAAGAGCCTTTGAGGTGTGGTGGCGCAGAACTTTTGTCAGACCTTATATGGAAGGACAAGGTAATGTCGTATCAGATAGTTCTACCATGTCAAAGGAGCAAGCGTTGTAA 1602 0.4488 MADIKLTRVDQGQTKIKNVPIAVTPEGFWCCPSPVVFQKSLKTQNSLNKPQPSSPPPKTSAQKKTVTGSERRQAPAPSRLAMSDDQQCTGSERPPSGTPVATERAPRPKVESLPRKVAIEFGEDGTSDTKVVLFGKQGFCVKLSVHKDVLTEKSSFFAEKLSEQSGLPSIQINDCEDVEIYVETVGLMYCKDMKQRLMKQSVSRTLRILKVAEFLGFSSCIQSCLEYLEAVPWVGEEEERVVSTVLRLQGEGIGINPVLKRVSSDISNVPKDTLCHIIELVLKSNEERGRREMKSVVLKLLRENNSTPSHAGSVDICIDTIHKSCRSCLDSLLSLFQQAAEPDFANKPSDHREPIAKRIALEADNVSWLAEILIDKQAADEFAVMWASQQELAVLHGKLPVVCRYHISCISGKLYVGIGRGELLPSKETRQLLLQTWLQPLMDDYSWLHHACRSFDRKAVEEGIGRTILTLPMEDQQSILLSWLGSFLKGGDNCPNLQRAFEVWWRRTFVRPYMEGQGNVVSDSSTMSKEQAL 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0220 533 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 117 517 IPR038920 -
Lele50g0220 533 MobiDBLite consensus disorder prediction 58 72 - -
Lele50g0220 533 Gene3D Potassium Channel Kv1.1; Chain A 122 241 IPR011333 -
Lele50g0220 533 MobiDBLite consensus disorder prediction 44 111 - -
Lele50g0220 533 MobiDBLite consensus disorder prediction 80 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0220 Lele-ChrLele50 1314140 1317007 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0220 50 1314140 1317007 Lele53g0084 53 640629 647493 CCT
Lele50g0220 50 1314140 1317007 Lele54g0085 54 710039 719138 CCT
Lele54g0090 54 748847 749356 Lele50g0220 50 1314140 1317007 CCT
Lele56g1342 56 16618287 16619123 Lele50g0220 50 1314140 1317007 CCT
Lele50g0220 50 1314140 1317007 Lele51g0222 51 1250269 1253880 hybridization
Lele50g0220 50 1314140 1317007 Lele52g0224 52 1333948 1336842 hybridization