Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0219 ATGTCCATGTCCCAGGATTATCATCAAGCGGGAATCTTCAGCTTCTCGAATGGATTCGTGAGATCCACTGTAACTCAGCAACCTCATCAACAGCCGCAGATCCGGAGGGACAAAGTGAGGGTGCAAGGCTTCGACCCGCCACCGCCGTTAGTGGGTATTGAGGAAGAGGAATCTGGAGGCCTTCCCGTGTACGAAACCGCCGGGATGTTATCGGAGATGTTTAGTTTCCCTCCCTCAGGCGCCACCTCTACTGAATTGTTGGAACAACAACCCTTGACGGCGACGTATCGACCCTTCAGCAGGCCACAGCAGGTTACTGCGATGGTCAGTGAGTGGTACGGAGACCAACAAGGCATGGTAAATGGTTTGGGAGATTCGAAGAATAACCACCACCACCACCGTCCTCATCAGCGTCAGATTTCAAGCATGAATGCGGCGGACTCAGCGGCTGCCATGCAACTTTTTATCATGAACCCTCAAACTAGATCACCTTCCCCTCCTCACAATCCTTCCACTAGTTCTTCTACCCTCAACATGTTGCTCCCCAATCCTTCCTCTTCTCTGCAAGAATTTCCAGCAGGCCCCGCAACGGGAGGAGCTTTTGGTCAATTCACATGGCTTCCATTTTCTGAAGTAGGTTCTCAAGACGCCAACACCAACCAGAATCCGGGTGAAATCGGAGGGGTTGTGGAAGGCCAAGGTCTTTCTTTATCGTTGTCATCTACATTAGAAGCAGCGAAAGCCGAGGAACTGAGGATTGGCGATAGCGGGTTTCTTAATTATTACAGTCAAAGTGCAGCAGGAGGGTCCTCATCTGCTCAGTATCCGTACAAGAATTTGGGTGGAGGTCAAACTCAAACTTACACATTGCATTTACAAGGAGTAGCACAGAACCACCAACTCCATGCTGGTTTCGGCTCATCGTTAGGGGTTTCAAATGTGCTGAGGAACTCCAAGTATGTGAAGCCTGCTAAAGAATTGCTTGAAGAATTCTGCAGCGTCGGGAGGGGTCAGTTCAAGAAGGACAAATTCACCAGGCAGAACTCCAACCCTAATTCCAATTCCGCTGTTGACGCCGCCCCTTCTTCATCTTCAACAAAAGATCCTCCTCCTTTGTCAGCAGCCGACAGGATTGAGCATCAGAGAAGGAAGGTCAAATTCCTATCCATGCTTGACGAGGTGGACCGGAGATACAGTCACTACTGCGAGCAAATGCAGATGGTGATGAACTCGTTTGACTTGGGGATGGGTTTTGGGGCGGCTGTGCCATATACGGCGCTGGCACAGAAAGCGATGTCAAGGCATTTCCGGTGTCTGAAGGATGCCATATCAGCACAACTGAAGCACAGTTGCGTGTTGCTGGGCGAGAAAGATGGTTTGGGTTCGTCGGGTTTGACCAAGGGTGAGACCCCAAGGTTGAAGCTTCTGGAGCAAAGCCTGAGGCAGCAGAGAGCCTTCCACCAGATAGGCATGATGGAGCAGGAGGCTTGGAGACCCCAGCGAGGCCTTCCCGAACGTTCTGTCAACATTTTGAGAGCCTGGCTTTTTGAGCATTTCCTTCATCCGTATCCAAGCGATGCAGATAAGCATCTGTTGGCTCGACAGACTGGTCTATCGAGAAACCAGGTATCAAACTGGTTCATTAACGCCAGGGTAAGGTTGTGGAAACCCATGGTAGAGGACATGTATCAACAAGAGCTCAAAGAAGCTGGTGATGAAGAAGAGAGAGAGAACAGCAACAATAGTGGCAACATGGCTCAAACTCCCACGCCTACAACCACCACCACCACATCAACAACAACGGCGCCACCCACGACGCCACCATCCAAAAGATCCGACGTCAGTGCCTCCGAAAGAGACCCCTCGCTCGTGGCAATCAATAGACAAGCCCTCTCGGAAAACCAAGCAAAGCAACAGTCGTCCGCCGCCACCATGCCCAGCACCACCGCCTCTGAGGTGACGCCACTCGTGTCCCAATGTTTCCGATCAGACCTTCCCCTGCACAGTCTCGATGGCACGTGTCGGCATGGCAGCATGGTTGCAGAAGACTGCGGGACCGCCTCGGCCACTGCTAACAATATTGGATCTACTCTCATTAGGTTCGGGACCACCGCCAGTGATGTGTCGCTTACCCTAGGGCTACGCCACGCCGGGAACATCCCTGACACTTCTCCTTTCTCTGTTAGAGATTTTGGAGGCATCTGA 2205 0.5179 MSMSQDYHQAGIFSFSNGFVRSTVTQQPHQQPQIRRDKVRVQGFDPPPPLVGIEEEESGGLPVYETAGMLSEMFSFPPSGATSTELLEQQPLTATYRPFSRPQQVTAMVSEWYGDQQGMVNGLGDSKNNHHHHRPHQRQISSMNAADSAAAMQLFIMNPQTRSPSPPHNPSTSSSTLNMLLPNPSSSLQEFPAGPATGGAFGQFTWLPFSEVGSQDANTNQNPGEIGGVVEGQGLSLSLSSTLEAAKAEELRIGDSGFLNYYSQSAAGGSSSAQYPYKNLGGGQTQTYTLHLQGVAQNHQLHAGFGSSLGVSNVLRNSKYVKPAKELLEEFCSVGRGQFKKDKFTRQNSNPNSNSAVDAAPSSSSTKDPPPLSAADRIEHQRRKVKFLSMLDEVDRRYSHYCEQMQMVMNSFDLGMGFGAAVPYTALAQKAMSRHFRCLKDAISAQLKHSCVLLGEKDGLGSSGLTKGETPRLKLLEQSLRQQRAFHQIGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEDMYQQELKEAGDEEERENSNNSGNMAQTPTPTTTTTTSTTTAPPTTPPSKRSDVSASERDPSLVAINRQALSENQAKQQSSAATMPSTTASEVTPLVSQCFRSDLPLHSLDGTCRHGSMVAEDCGTASATANNIGSTLIRFGTTASDVSLTLGLRHAGNIPDTSPFSVRDFGGI 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0219 734 SMART HOX_1 497 561 IPR001356 GO:0003677
Lele50g0219 734 MobiDBLite consensus disorder prediction 159 194 - -
Lele50g0219 734 MobiDBLite consensus disorder prediction 567 620 - -
Lele50g0219 734 Gene3D - 500 562 - -
Lele50g0219 734 MobiDBLite consensus disorder prediction 580 612 - -
Lele50g0219 734 MobiDBLite consensus disorder prediction 159 192 - -
Lele50g0219 734 ProSiteProfiles 'Homeobox' domain profile. 494 557 IPR001356 GO:0003677
Lele50g0219 734 SMART prehox3 309 445 IPR006563 -
Lele50g0219 734 Pfam Homeobox KN domain 514 553 IPR008422 GO:0003677|GO:0006355
Lele50g0219 734 CDD homeodomain 497 558 IPR001356 GO:0003677
Lele50g0219 734 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 150 579 - -
Lele50g0219 734 FunFam BEL1-like homeodomain protein 4 500 562 - -
Lele50g0219 734 MobiDBLite consensus disorder prediction 342 379 - -
Lele50g0219 734 MobiDBLite consensus disorder prediction 344 370 - -
Lele50g0219 734 SUPERFAMILY Homeodomain-like 499 564 IPR009057 -
Lele50g0219 734 Pfam Associated with HOX 314 444 IPR006563 -
Lele50g0219 734 MobiDBLite consensus disorder prediction 23 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0219 Lele-ChrLele50 1301037 1308660 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0219 2 544 Homeobox Transcription Factor Family AT4G36870 50.345 5.13e-142 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Lele50g0219 POX 1.5e-47 No_clan