Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0202 ATGAAAGTTCCCGCTTCGTCGTCCCCACAAACCCACCTTCCCTCGGATCCAAAACCCACTGTCCGAAACCTTTCCAACGTCAATCAGGCCTCCTGCTACGAACCCACTTCTGTTCTCGACCTCTGCCGGAGCCCCAGCCCTAGCTCCGCCACCGTCCCTGAAAATCCCACCGCCCACTCCCTGCCCAAGCCTGAAGACTCTCTGGAGTTGGACGAACATGCGTTGCATAGTCTGGATTGGGATTCCATCATGAAGGATTGGGGTTTACACAATGACTCTCTTGCTAACGTTATGAAGAGTACCGTTCCACAATCAAACCCATGTGAGCCTCAGGACCCACATCTTCCTGAATTCCCCAGTTCTCAGGAGGTCCCTTTCGATCATGCCCCAGATTTGAGCCTCTCGGATGTTTATATGAATCAAAATATGGGTTGCAATTACAATAACTCCTTTGATCATCTGGTGCATCAGTTCAATCATAACCATAGTTGGCAAAGCAACGGGTTTGATCTGATCGAGGAGCTTATTCGAGCGGCCGATTGCTTCGACACGAAGCAGCTACAGCTTGCCCAGGTGATATTGGAGCGGCTCAATCAACGCCTCCGATCCCCCGTCGGAAAACCCCTCCACAGAGCTGCGTTTTATTTCAAAGACGCTCTCCAGTCTCTTCTCTCCGGTTCGAACCTGACCCCACGTCTTTCTTCCTTGGTGGAAATCGTTCAAAGCATCAGAACCTTCAAAGCTTTCTCAGGAATTTCTCCAATTCCCATGTTCTCCATCTTCACCACCAACCAGGCACTCCTCGATGCCCTTCACGGATCATCCTTCATGCACATCATTGACTTCGAAATCGGTTTAGGCATTCAATACGCTTCTCTGATGAAAGAGATTGCAGAGAAGGCCGAGTCATGTAGAATGAATTCGCCAGTCCTTCGGATCACGGCTGTCGTGCCAGAAGAATACGCCGTGGAAAGCAAATTGATCCGGGGGAACCTGAACCAGTTCGCTAACGATCTAAGGATCCGAATCCAAACCGAGTTCGTGCCGTTCCGAACCTTCGAAACGTCTTTACTGAAGGCCGTCAAGTTCATGGATGGTGAGAAGGCCGCCGTTCTGCTATCCCCGACTATCTTCCGTCGTCTCGGATCAGACAAAAAGATCGCCGCGTTTCTAGGGGATATTCGGGGGGTTTCTCCGAGTGTGGTTGTATTCGTAGACGGCGAGGGGTGGGCAGACGACGCTGCAGCGACGTCGTTTCGTCGGAGTGTTGTGAACAGCCTGGAATTCTACTCGATGATGTTGGAGTCGTTGGACGCGTCCCTTGTGGGAGAAGGTGGGGAGTGGATAAGAAGAATAGAGATGACCTTGTTGCGGCCGAAGATATTGGCAGCGGTGGAAGGCGGAGGACGGCGGGTTCCGGCGTGGAGGGAGATGTTTTACGGGGCGGGAATGAGGGCAGTGCAGTTAAGCCGGTTCGCGGATTTTCAAGCGGAGTGCTTATTGGCTAAGGTACAGATCAAAGGCTTCCACGTGGCAAAACGGCAGGCAGAATTGGTACTGTTCTGGAATGAGCGGGCCATAGTTTCCACATCAGCTTGGCGATGTTAG 1608 0.5199 MKVPASSSPQTHLPSDPKPTVRNLSNVNQASCYEPTSVLDLCRSPSPSSATVPENPTAHSLPKPEDSLELDEHALHSLDWDSIMKDWGLHNDSLANVMKSTVPQSNPCEPQDPHLPEFPSSQEVPFDHAPDLSLSDVYMNQNMGCNYNNSFDHLVHQFNHNHSWQSNGFDLIEELIRAADCFDTKQLQLAQVILERLNQRLRSPVGKPLHRAAFYFKDALQSLLSGSNLTPRLSSLVEIVQSIRTFKAFSGISPIPMFSIFTTNQALLDALHGSSFMHIIDFEIGLGIQYASLMKEIAEKAESCRMNSPVLRITAVVPEEYAVESKLIRGNLNQFANDLRIRIQTEFVPFRTFETSLLKAVKFMDGEKAAVLLSPTIFRRLGSDKKIAAFLGDIRGVSPSVVVFVDGEGWADDAAATSFRRSVVNSLEFYSMMLESLDASLVGEGGEWIRRIEMTLLRPKILAAVEGGGRRVPAWREMFYGAGMRAVQLSRFADFQAECLLAKVQIKGFHVAKRQAELVLFWNERAIVSTSAWRC 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0202 535 MobiDBLite consensus disorder prediction 42 65 - -
Lele50g0202 535 ProSiteProfiles GRAS family profile. 162 534 IPR005202 -
Lele50g0202 535 MobiDBLite consensus disorder prediction 1 28 - -
Lele50g0202 535 Pfam GRAS domain family 171 534 IPR005202 -
Lele50g0202 535 MobiDBLite consensus disorder prediction 42 56 - -
Lele50g0202 535 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 136 527 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0202 Lele-ChrLele50 1190437 1192044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0202 68 534 GRAS Transcription Factor Family AT4G36710 53.320 2.31e-159 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele50g0202 GRAS 1.3e-82 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0202 50 1190437 1192044 Lele52g0205 52 1213034 1214641 hybridization