Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0201 ATGAAACATAACAGAGCTTTGCTGGCTTCGCCGTTTTCACTTCTCTGGTTCTTTTTGTTACTCACGCTTCCCCTACATGGGAAGGCTTCGAGTTCTGAGAATGTGACAAAGGAAGAAGAGGGTCTAGTGATAAGGAAATCTGAGTGGATGAGAATAACAAGCACTGAATTTGGAGAGGTGTCTGCCATTGACGTCAAAGACGGACAAAGATATTCAGTCAATTACACTCGAACCCAACTCTCTCCTCCTTCCTGTTCTTCTTCACGGAGACATGCTCTTCTATGAAGTGGAAAGCTGACTTGGGCATATGATGGTGATACTGAAACAATATATCTACGTCAAGGTGACATCGGCGTACTTGGAACAGTAATTTCAAACAAAACTGAGACCCCTGCTATAGTGCATGCGGTGTCGACGAAGAAAAAGGAAATGTTGGAATTGGAGGCTTGGAATCTAAACAGAGTATTATCAGGTGGTGAGATTGCCACTGGCGTGTTCTCCAACGACAATAAACCTCGTACAATTAACGTCTTTGAGAAAGAACCTGATTTTACGGACTGTAATGGGTGGAGCCTCACGGTGACCCACAGAAATTTGAAATCATTAGAGCAGATCGACTTTGGCTTCCTCATGGTGAATTTGACCGCGGGATCAATGATGGGGCCACACTGGAATCCACTGGCAACAGAGATAGCAATGGTGCTGGAAGGGGAAGGCATGGTTCGTGTGATGTCTTTCAACAATGACTCTCTGGTTTTTCTGGGGTTTAGCACCACAATGAAGAAGTTATATCCACAATTTTTAGTGGGGAAGAGATCGGTGATACAAATTATAGACAAGCGCATATTAGCTGCAGCTTTCAATGTGAGTGAGAGAACAATTAAGCAGCTTTTGAAATCTGAGGCAGGATCCATCATATTGGGGTGTCTATCATGCGCCGAGGAAGAGGAAAGGATCATGATAGAAGAAGCCAAAAGGAGGGAGGAGGGAGGAGCAAGGAAGAGAGAAGAGGAAGAAGCAAGGAAGAGAGAAGAAGAGGAAGCAAGGAAGAGAGAAGAGGAAGAAGTAAAAAAGAGAGAAGAGGAAGAATCAAGAAAGAGAGAAGAGGAAGCAGAGAAAAGAGAAGGAGAGGAAGCAAGGAAAAGAGAGGAGGAAGAGTCAAGAAAGAGAGAAGAGGAAGTGGCAAGAAGAAGAGAAGAAGAGGAAGAAGCAAGAAGGAGAGAGGAGGAGGAGGAAAGCCCAGGAAGTGAAGAAGAGGAAGAAATGAGAAGGATGCATCTGTATTAA 1287 0.4429 MKHNRALLASPFSLLWFFLLLTLPLHGKASSSENVTKEEEGLVIRKSEWMRITSTEFGEVSAIDVKDGQRYSVNYTRTQLSPPSCSSSRRHALLXSGKLTWAYDGDTETIYLRQGDIGVLGTVISNKTETPAIVHAVSTKKKEMLELEAWNLNRVLSGGEIATGVFSNDNKPRTINVFEKEPDFTDCNGWSLTVTHRNLKSLEQIDFGFLMVNLTAGSMMGPHWNPLATEIAMVLEGEGMVRVMSFNNDSLVFLGFSTTMKKLYPQFLVGKRSVIQIIDKRILAAAFNVSERTIKQLLKSEAGSIILGCLSCAEEEERIMIEEAKRREEGGARKREEEEARKREEEEARKREEEEVKKREEEESRKREEEAEKREGEEARKREEEESRKREEEVARRREEEEEARRREEEEESPGSEEEEEMRRMHLY 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0201 428 Pfam Cupin 176 248 IPR006045 -
Lele50g0201 428 Coils Coil 321 412 - -
Lele50g0201 428 PANTHER OS03G0336100 PROTEIN-RELATED 122 245 - -
Lele50g0201 428 Gene3D Jelly Rolls 167 245 IPR014710 -
Lele50g0201 428 MobiDBLite consensus disorder prediction 341 428 - -
Lele50g0201 428 SMART Cupin_1_3 175 295 IPR006045 -
Lele50g0201 428 Gene3D Jelly Rolls 246 322 IPR014710 -
Lele50g0201 428 CDD cupin_7S_vicilin-like_C 182 300 - -
Lele50g0201 428 SUPERFAMILY RmlC-like cupins 168 308 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0201 Lele-ChrLele50 1184881 1186986 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0201 124 316 Miscellaneous Gene Families AT2G18540 41.597 6.08e-49 175
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0201 50 1184881 1186986 Lele53g0065 53 507987 510883 CCT
Lele50g0201 50 1184881 1186986 Lele54g0067 54 549235 552359 CCT
Lele50g0201 50 1184881 1186986 Lele55g1432 55 20557656 20560563 CCT
Lele50g0201 50 1184881 1186986 Lele56g1364 56 16800036 16802914 CCT
Lele50g0201 50 1184881 1186986 Lele51g0201 51 1136982 1140277 hybridization
Lele50g0201 50 1184881 1186986 Lele52g0203 52 1207015 1208161 hybridization