Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0177 ATGACAAGCCCTGCGCGAAACTACGCTGGGAAATTGAAAGAAGGAAAAGGTTCGAAGCTAATGGAGAGCGAGAAAATCGTGTATTCATCGAGCCCGTATCCTGTTCACTTGGATTTTGAGAGCGGTCGAACGGTGTTCTTCGACGGGGTGAAGAAGTTCGAGCTAGAGGATTTGCTTAAAGCTTCCGCGAAAATGCTGGGAAAAGGTGGGTTAGGGACGGCGTACAAGGAGGTTCTGGATGATGGAAAAGTCGTCGCCGTCAAGAGTCTCAAAGACGCTCAGATTGGAGGGGAGAAAGGGTTCGAAAAACATATGGAAATTCTGGGAAGATTGAGAAACCCAAACACCGTTCATTTGAGAGCGTTCTATTCTGCCAGAGACGAGAAGTTGCTCGTCTCTGAGATCTACGTGCCCAACTGA 420 0.4833 MTSPARNYAGKLKEGKGSKLMESEKIVYSSSPYPVHLDFESGRTVFFDGVKKFELEDLLKASAKMLGKGGLGTAYKEVLDDGKVVAVKSLKDAQIGGEKGFEKHMEILGRLRNPNTVHLRAFYSARDEKLLVSEIYVPN 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0177 139 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 29 139 - -
Lele50g0177 139 SUPERFAMILY Protein kinase-like (PK-like) 64 135 IPR011009 -
Lele50g0177 139 ProSiteProfiles Protein kinase domain profile. 60 139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g0177 139 Gene3D Phosphorylase Kinase; domain 1 36 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0177 Lele-ChrLele50 1035474 1036597 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0177 6 139 Receptor kinase-like Gene Family AT1G68400 56.250 3.74e-44 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele50g0177 None None None