Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0146 ATGTTTCTGTATCCTAATATGTATACAGTTGGAGTGAAACATTTCTCAAGTCTGCAGCCAGCTAGGCTAGCCCTTTGGTTGTCTTGGGATCTTCTAGCTAGTTCTAAACCAAGTATGGAGTATAGTGATTTCCTCCTTCAGCAGCATCAGCCCCAACAAGAATATGCTCCCTACTATAATCCATCCTTTACTTGTGTGGCTTGGAACTCCAGCAATTTATGTCTGTTTACCACTGAAAGCGGTCAAAGCACTGAAATAAATTTAAGAGATAAAGGGAAAGAATATGATCTGGATCCTCAACGTTCATCGGGTGAGGATATGCTTATGAAAGACGAGGTGTCCGTGTCTGATAATATTTATCTTCCCAGTTCTTGTGTGAATGATTCATCAATCAGTGAACATTCTGATCATGTAACTGGAAAAGAGATTTGGCCTGCAGGGATAGCCCTAACCAATATGACGACGTCGTATGACACCTTAGGTGCTGCATCTTCATCGTCATGCTCCACCTTATCAACCTTAGAGAGGCCTCCTTCCTTATTACTGTCATGCTCTCTGGGCTTAACTTCACAAATGTTGCTGGGCGGCAGTTCTTGTGGTGGCCTTCGTCTTTCCTACGATTCTTTTGGTCTCGATGACATGCAACAACGAGAAAATAGTCCACCCAACAGCTCAGATAAAATTTCAGAATTCGTAAGTGGAAGTGGAGTTGGACGGGCAAAAACGTCTCGCGGTTGGTCTCAATTGAAGGAATATGAAGGAAGAGCAAAGAAGTCAAGAACTTCATGCCCTACCTTGAAGGTCACAAAGGAAAAGCTGGGGGACAGGATTCAGACCCTTCAGAGGTTAGTGGCACCTTTTGGGAAGACCAATACTGCCTCCGTATTGAATGAAACAATAGGCTACATCCACTTCCTTCATGACCAAATTCAGACTTTGAGCATCCCTTATATGAAGTCGTGGAAAACAAAGCCCTTCGGAACGGTGCAGTTGGATTCTATAGAGGAAAATGGCAGAGAATGGAAGCCAGACCTTAGAAGCAGAGGCCTCTGCCTTGTGCCCCTTTCTTGCGCTTCATATATTCATGATTTCGACTAG 1098 0.439 MFLYPNMYTVGVKHFSSLQPARLALWLSWDLLASSKPSMEYSDFLLQQHQPQQEYAPYYNPSFTCVAWNSSNLCLFTTESGQSTEINLRDKGKEYDLDPQRSSGEDMLMKDEVSVSDNIYLPSSCVNDSSISEHSDHVTGKEIWPAGIALTNMTTSYDTLGAASSSSCSTLSTLERPPSLLLSCSLGLTSQMLLGGSSCGGLRLSYDSFGLDDMQQRENSPPNSSDKISEFVSGSGVGRAKTSRGWSQLKEYEGRAKKSRTSCPTLKVTKEKLGDRIQTLQRLVAPFGKTNTASVLNETIGYIHFLHDQIQTLSIPYMKSWKTKPFGTVQLDSIEENGREWKPDLRSRGLCLVPLSCASYIHDFD 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0146 365 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 125 359 - -
Lele50g0146 365 MobiDBLite consensus disorder prediction 213 239 - -
Lele50g0146 365 MobiDBLite consensus disorder prediction 213 231 - -
Lele50g0146 365 CDD bHLH_AtbHLH_like 267 314 IPR045239 -
Lele50g0146 365 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 257 306 IPR011598 GO:0046983
Lele50g0146 365 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 270 319 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0146 Lele-ChrLele50 884874 887274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0146 197 360 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 47.399 2.42e-36 135