Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0129 ATGGTCAACTGGATTTGGAAAGCCACTTTCCGATTGATCAAACACTCGACTATATTATTCTCGGAACGCCGAGGTATCCCTCCGGCTATAGTTTCCGGATTCAGGGGTTTCTCCAATGGAAGTAGCTCTCAGTTAAAAGGCAACATTTTTTGTGGAAAGCAGAGGCTTTTCCCTATTTCCGATTTCGTAGAAACAATAGCAATTCGTATCGGAATGCCCGGTGGAGTTCAGCGTCAATGCTATAGTTCACTAGCTGGGTTGGTTCATAGGAGCCCTCGGTTTTCAACGTTAAATGACGAGGATATTAGATATTTTGAGGGCATACTTGGGAACAAAAATGTCATCCAGGACGAGGAGAGGCTTATTGCTGCCAATACCGATTGGATGCACAAATATAAAGGATCCAGTAAACTTCTTCTGCTGCCACGGACCACCGAGGAGGTATCTCTGATACTAAAATACTGCAACTCTAGATGCTTGGCTGTTGTTCCTCAAGGTGGAAATACTGGCCTTGTGGGTGGAAGTGTACCTGTTTTTGATGAAGTGATTATCAATCTCAGTTTGATGAATAAAATCACATCTTTTGACAAGGTAAGTGGTATATTGGTGTGTGAAGCAGGATGCATATTGGAAAATATAATAACATTCCTGGACAATGAAGGATTTATTATGCCACTAGACTTAGGTGCCAAAGGCAGCTGCCAGATTGGTGGAAATGTCTCAACTAATGCTGGTGGTTTGCGCCTTGTTCGCTATGGATCCCTTCATGGAAATGTACTTGGTCTTGAAGCTGTTCTAGCAAATGGTACTGTAATTGACGTGCTTAAGACACTACGCAAAGATAACACTGGCTATGACTTGAAACATCTATTTATAGGGAGCGAAGGTTCCCTAGGAATTGTTACTAAGGTTTCCATACTTACACCACCAAAATTATCTTCCACCAACGTGGCTTTCCTTGCTTGTAAAGATTATATCAGCATCCAGAAATTGTTACAGGAAGCAAAGAGGAGACTTGGGGAGATATTATCTGCATTTGAATTTTTAGATGGCCAATCTATGAATTTGGTTTTAAATCATTTGGAAGGTGCACGGAATCCATTACCTGCATCAATGCATGACTTTTATGTTCTGATTGAGACTACAGGAAGTGATGAATCTTTTGACAAGCAAAAGCTTGAAGCATTCTTACTTCACTCTATGGAAAATGATTTGATATCTGATGGCGTTCTTGCCCAAGACATAAACCAAGCTTCATCATTTTGGCACTTACGTGAGGGCTTACCAGAGGCACTAACAAGAGCAGGAGCTGTTTACAAGTATGATTTATCAATACCTGTTGAAAAGATGTACACTCTTGCCGAGGAAATGCGCACTAGACTAGGGAATGTAGCTAATGTAGTAGCATATGGTCACCTAGGAGATGGTAATTTGCACTTAAATATCTCAGCTCCCCAGTATGATGATAAGATTTTAACACAAATAGAGCCTTATGTGTATGAGTGGACATCGAAGCACAATGGCAGTATAAGTGCAGAGCATGGCCTTGGATTAATGAAAGCTAATAAGATTTTCTACAGTCAGTCACATGAAACGGTGCAATTAATGGCCTCAATCAAGAATTTGCTGGACCCCAACAAAATACTCAACCCATATAAAGTTCTACCAGACTCTGCCTGTTCATAG 1686 0.4093 MVNWIWKATFRLIKHSTILFSERRGIPPAIVSGFRGFSNGSSSQLKGNIFCGKQRLFPISDFVETIAIRIGMPGGVQRQCYSSLAGLVHRSPRFSTLNDEDIRYFEGILGNKNVIQDEERLIAANTDWMHKYKGSSKLLLLPRTTEEVSLILKYCNSRCLAVVPQGGNTGLVGGSVPVFDEVIINLSLMNKITSFDKVSGILVCEAGCILENIITFLDNEGFIMPLDLGAKGSCQIGGNVSTNAGGLRLVRYGSLHGNVLGLEAVLANGTVIDVLKTLRKDNTGYDLKHLFIGSEGSLGIVTKVSILTPPKLSSTNVAFLACKDYISIQKLLQEAKRRLGEILSAFEFLDGQSMNLVLNHLEGARNPLPASMHDFYVLIETTGSDESFDKQKLEAFLLHSMENDLISDGVLAQDINQASSFWHLREGLPEALTRAGAVYKYDLSIPVEKMYTLAEEMRTRLGNVANVVAYGHLGDGNLHLNISAPQYDDKILTQIEPYVYEWTSKHNGSISAEHGLGLMKANKIFYSQSHETVQLMASIKNLLDPNKILNPYKVLPDSACS 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0129 561 FunFam D-2-hydroxyglutarate dehydrogenase, mitochondrial 190 310 - -
Lele50g0129 561 Gene3D - 88 187 IPR016167 -
Lele50g0129 561 SUPERFAMILY FAD-binding/transporter-associated domain-like 100 310 IPR036318 GO:0050660
Lele50g0129 561 FunFam D-2-hydroxyglutarate dehydrogenase mitochondrial 436 514 - -
Lele50g0129 561 ProSiteProfiles PCMH-type FAD-binding domain profile. 132 311 IPR016166 GO:0071949
Lele50g0129 561 FunFam D-lactate dehydrogenase mitochondrial 515 555 - -
Lele50g0129 561 Gene3D - 190 311 IPR016169 -
Lele50g0129 561 FunFam D-2-hydroxyglutarate dehydrogenase, mitochondrial 88 187 - -
Lele50g0129 561 PANTHER D-2-HYDROXYGLUTARATE DEHYDROGENASE, MITOCHONDRIAL 85 558 - -
Lele50g0129 561 FunFam D-2-hydroxyglutarate dehydrogenase mitochondrial 312 434 - -
Lele50g0129 561 Gene3D - 515 555 IPR016171 -
Lele50g0129 561 Gene3D - 436 514 - -
Lele50g0129 561 SUPERFAMILY FAD-linked oxidases, C-terminal domain 315 557 IPR016164 GO:0003824|GO:0050660
Lele50g0129 561 Pfam FAD binding domain 138 274 IPR006094 GO:0050660
Lele50g0129 561 Gene3D - 313 434 - -
Lele50g0129 561 Pfam FAD linked oxidases, C-terminal domain 314 554 IPR004113 GO:0003824|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0129 Lele-ChrLele50 789697 796349 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0129 50 789697 796349 Lele54g0545 54 11893061 11894809 CCT
Lele50g0129 50 789697 796349 Lele56g0889 56 7479772 7481399 CCT
Lele50g0129 50 789697 796349 Lele51g0124 51 727172 740521 hybridization
Lele50g0129 50 789697 796349 Lele52g0134 52 792419 798981 hybridization