Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0120 ATGCGAACGCTTTGCGACGCTTGTGAGAGCGCTGCCGCCATCGTATTCTGCGCCGCCGATGAGGCCGCGCTCTGCCGTGCCTGCGACGAAAAGGTTCACATGTGTAATAAGCTAGCTAGCCGGCATATCAGGGTTGGCCTCGCCAGTCCAAGTGATGTGCCACGCTGTGACATTTGTGAAAATGCACCTGCTTTCTTCTACTGCGAGACGGATGGAACTTCTCTGTGTTTGCAATGTGACATGATAGTTCATGTTGGAGGTAAAAGAACACATGGAAGATATCTTCTTTTCAGGCAGCGGGTTGAATTTCCAGGAGATAAACCTGGTCTCGCGGAAAACCTGGCTTCACAGCCTCTGGATGCAGTTGAGACCAAACGAGGCCAAAATTCATTGCTTAAAATAAAAATGGGAGAGAAACAACAGAATCACAGGATGCCAACCCCAGAACATGATGCTGATGCGCATGCCAAGATGGATGCTAAAATGATTGATCTGAACATGAAGCCTCAAAGAATACATGAACACGGGTCAAATAATCAGGTTTGGGTGGATGAGAACCATAAAAAAGCCAACCGGCATACAGCAGTTGACAAGATCTTAACCTGGATATCCATGGAGTCCAAAGAACTTAAGATATTTCTCAGGCATGCTAGTTACAATGTAGGCATAATGTTTTTACATCCTGAATCAGTGAGTGAGGGGTTGGAGCGTCAAGCTGAGCGGTCATTTCGCCTCTGTGTCAGCTTCTCAGTGGACTGTGACGGGAAAAGATTTTGGACAGATCATTCTTCGCCATCGTCGAAGATCGGAGAAGTTGAAGATGAGAAGACGGAGCTGGAGAAGTTGAAGACGAAGTGGAGTGATCTGGATCTGCAGAGGAGGCGGTGGAGTTATAAGCTCGATGCTTATGCCAAATATGTAAAAGAGTATTACGTTGGAACTTTTGGTGTTAATGTTCAAACTTATAATCAGAAGCACCTGAAAAATACTGCTATTACAGAAGACAGTGCTGATGGATTGTGGTGGTTTCAAGTTTGCACTGGAGTTGCATACTTTCAGGTGGCTCCTGCAAATGATAGTATACGTTCCTCTAAAGTTGACACAAGGCAAGTTTCTCATCTCCAATATCATTTGGACCTCTGCGAAAATGTCTTCGGAGAGGGCATCTTTCCTGATGTCTCTTCAACTAATATATGCTATGGAGGCACAAAAATTTCTGTGCCTTCCTACACTGTATCATGTTATAATTGTGGCCATGGCACCAATATGCGAGGATGTCCTCAATCTCCTTTGAACCTTGAAGGTAACGAGAAGAACTGCGCTGATCCCGATGCGGTCCGCAAAATAAGGCAAAAGATCACAGGGCATGTGGACTTGTGGCTATCCGAGTGCCAACACTCTCTCTGA 1407 0.4563 MRTLCDACESAAAIVFCAADEAALCRACDEKVHMCNKLASRHIRVGLASPSDVPRCDICENAPAFFYCETDGTSLCLQCDMIVHVGGKRTHGRYLLFRQRVEFPGDKPGLAENLASQPLDAVETKRGQNSLLKIKMGEKQQNHRMPTPEHDADAHAKMDAKMIDLNMKPQRIHEHGSNNQVWVDENHKKANRHTAVDKILTWISMESKELKIFLRHASYNVGIMFLHPESVSEGLERQAERSFRLCVSFSVDCDGKRFWTDHSSPSSKIGEVEDEKTELEKLKTKWSDLDLQRRRWSYKLDAYAKYVKEYYVGTFGVNVQTYNQKHLKNTAITEDSADGLWWFQVCTGVAYFQVAPANDSIRSSKVDTRQVSHLQYHLDLCENVFGEGIFPDVSSTNICYGGTKISVPSYTVSCYNCGHGTNMRGCPQSPLNLEGNEKNCADPDAVRKIRQKITGHVDLWLSECQHSL 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0120 468 FunFam B-box zinc finger protein 19 2 92 - -
Lele50g0120 468 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Lele50g0120 468 Gene3D Classic Zinc Finger 2 91 - -
Lele50g0120 468 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 184 - -
Lele50g0120 468 SMART bboxneu5 51 96 IPR000315 GO:0008270
Lele50g0120 468 SMART bboxneu5 1 47 IPR000315 GO:0008270
Lele50g0120 468 Pfam B-box zinc finger 52 90 IPR000315 GO:0008270
Lele50g0120 468 CDD Bbox1_BBX-like 56 96 - -
Lele50g0120 468 SUPERFAMILY B-box zinc-binding domain 48 86 - -
Lele50g0120 468 CDD Bbox1_BBX-like 4 47 - -
Lele50g0120 468 ProSiteProfiles Zinc finger B-box type profile. 51 96 IPR000315 GO:0008270
Lele50g0120 468 Gene3D alpha/beta hydrolase 309 465 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0120 Lele-ChrLele50 728482 735362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0120 1 190 C2C2-CO-like Transcription Factor Family AT4G38960 62.176 9.86e-77 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Lele50g0120 Peptidase_S28 0.00011 CL0028