Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0116 ATGGAGTCATGTGTCCCACCGGGCTTTCGGTTCCACCCGACGGATGAAGAGCTGGTTGGTTATTATCTCAGGAAGAAAGTTGCTTCTCAGAAGATAGATCTTGACGTTATCAGAGAGATCGATCTCTATCGCATTGAACCATGGGATCTCCAAGGCCACTATAAGGAAGAAGGCTGGGTTGTATGTAGAGCATTCAAGAAGAAAAGCAACGGCCAAACGAAGACAATAGAAGGATGGGATTCAGGCTACTTTTACGAGGAGACAAGTGGACTGGACCACATATCAAGGCAGGCGCAGAGTTTCTTAGCTCCAAGTTTTTTGTGTAAGAAAGAGATAGAAGCCGATAATAACTTGAGCTTCATGCATTCATCATCAGATCAGTTCGTACAGCTTCCTCAGCTAGAAAGTCCATCTCTGCCATTAATAAAGAGGCCAAGCTCAAGCTCAGCCCTAGTGTCTCTAATATCACACAATAATAATGACAACAATCACTACAAGAACGTCGAAGAAGATGACCAAAACAGGCTGGTCAACAACAACAAAAGGGTGACTGATTGGAGGGCTCTTGACAAATTTGTGGCTTCTCAATTGAGTCAAGATCAAGAGAGGCAATATGAGAATAGCGATAATCATGGAATGTCAGGCTTCGAAACGCACGAGGCGTTGCTGCTACTGCAGAGTAGTAGCGATGAAGGCAACAAGTTCATGAGCCCATTTTTAAATGGAAGCTCGGACTGTGACATTGGGATATGCGTGTTTGAGAAATGA 768 0.4414 MESCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIREIDLYRIEPWDLQGHYKEEGWVVCRAFKKKSNGQTKTIEGWDSGYFYEETSGLDHISRQAQSFLAPSFLCKKEIEADNNLSFMHSSSDQFVQLPQLESPSLPLIKRPSSSSALVSLISHNNNDNNHYKNVEEDDQNRLVNNNKRVTDWRALDKFVASQLSQDQERQYENSDNHGMSGFETHEALLLLQSSSDEGNKFMSPFLNGSSDCDIGICVFEK 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0116 255 ProSiteProfiles NAC domain profile. 5 158 IPR003441 GO:0003677|GO:0006355
Lele50g0116 255 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 2 52 - -
Lele50g0116 255 Pfam No apical meristem (NAM) protein 6 121 IPR003441 GO:0003677|GO:0006355
Lele50g0116 255 Gene3D NAC domain 14 128 IPR036093 GO:0003677|GO:0006355
Lele50g0116 255 SUPERFAMILY NAC domain 3 84 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0116 Lele-ChrLele50 694883 696940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0116 1 84 NAC Transcription Factor Family AT2G18060 62.222 8.35e-29 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele50g0116 NAM 1.1e-15 No_clan