Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0107 ATGGGACGGGTCATCCGTGCTCAGAGGAAGGGTGCTGGTTCAGTATTCAAGTCTCACACGCACCACCGCAAGGGTGCTGCGAGGTTCAGGAGCCTCGACTTCGGCGGAGGGAGAACTGAGAAGCCCCTTCTCAAAGCTGGTAATGCTTACCACAAGTTTAGGGTGAAGAGAAATTGCTGGCCTAAGGTGCGTGGTGTGGCCATGAATCCTGTGGAGCATCCTCATGGAGGAGGTAATCACCAACACATTGGTCATGCAAGTACTGTTAGGCGTGATGCTCCTCCTGGCCAGAAGGTGGGTCTCATTGCTGCCAAGAGAACTGGTCGTCTTAGGGGACAAGCTGCTGCAACTGCTGCTAAAGCTGATAAAAGTGCTTGA 378 0.5344 MGRVIRAQRKGAGSVFKSHTHHRKGAARFRSLDFGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAAKRTGRLRGQAAATAAKADKSA 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0107 125 ProSitePatterns Ribosomal protein L2 signature. 61 72 IPR022671 GO:0003735|GO:0005840|GO:0006412
Lele50g0107 125 Gene3D Ribosomal protein L2, domain 3 39 112 IPR014726 -
Lele50g0107 125 SUPERFAMILY Translation proteins SH3-like domain 35 110 IPR008991 -
Lele50g0107 125 MobiDBLite consensus disorder prediction 70 95 - -
Lele50g0107 125 Gene3D - 1 38 IPR012340 -
Lele50g0107 125 PANTHER RIBOSOMAL PROTEIN L2 35 119 IPR002171 GO:0003735|GO:0005840|GO:0006412
Lele50g0107 125 FunFam 60S ribosomal protein L2 34 111 - -
Lele50g0107 125 SMART Ribosomal_L2_C_2 2 95 IPR022669 GO:0003735|GO:0005840|GO:0006412
Lele50g0107 125 Pfam Ribosomal Proteins L2, C-terminal domain 36 89 IPR022669 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0107 Lele-ChrLele50 646810 648295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0107 1 35 Cytoplasmic Ribosomal Protein Gene Family AT4G36130 94.286 9.37e-16 69.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0107 50 646810 648295 Lele51g0102 51 583151 584626 hybridization
Lele50g0107 50 646810 648295 Lele52g0106 52 631456 632946 hybridization