Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0102 ATGGAACATCAACAGCAACAAGCAGCAAACGAGGATTCTGGAGGGAGTGGAAGAGGAGGGTATTTGTGCCGGCAAAGCAGTACAAGGTGGACTCCCACAAGTGACCAGATAAGGATACTGAAGGACCTTTATTACAACAATGGAGTTAGGTCCCCAAATGCTGAGCAGATTCAGAGGATCTCTGCTAGGCTGAGGCAGTACGGCAAGATCGAAGGCAAGAACGTCTTTTACTGGTTCCAAAACCACAAGGCTCGTGAACGCCAGAAAAAACGCTTCACTTCCTCCTCTGATCATCTCCCCAGTCCCATGCATTTGCAGAGACCTCCTCCTTCCACTGCCACTAACAATATTCCTCCACCTTCTAACTGGAAGCCTGATCACGAATCCATTATTCACCCCAAGTATTCTAGCATACCACAATCTCACGGCGTTTCTTCTGCTTCATCTTCTTCCGCAGGGATGGTTACTCTGGGACAGATGGCGAACTATGGATCTATGACTATGGAGAAGTGTTTTAGGGACTGCTCAATATCAGCAGGAGGAAGCCGCGGCCCCATGAACCACAATTTGGGATGGGTAGGTATGGATCCATACTCAAACTATACGAACTTCTTGGACAAAATAGGGCCCGGCGATCAAGAAACACTTAAAGACGAACAAGAAGGGGAAGATGGAGCCCCTGAGATTGAAACCCTCCCTCTGTTTCCCATGCACGGCGAGGACATCCATGGCTACTGCAACCTCAGGTCTGATTCTTCTTACTATGGCGGTGGCTGGTATCACGCCAATGAATATGGCGTCAAGAACAATGGCTCTCACCGTACTTCTCTCGAGCTCACTCTCAACTCCTACACCCGCAGATCTCCAGATTCAGCTTGA 879 0.4903 MEHQQQQAANEDSGGSGRGGYLCRQSSTRWTPTSDQIRILKDLYYNNGVRSPNAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSSSDHLPSPMHLQRPPPSTATNNIPPPSNWKPDHESIIHPKYSSIPQSHGVSSASSSSAGMVTLGQMANYGSMTMEKCFRDCSISAGGSRGPMNHNLGWVGMDPYSNYTNFLDKIGPGDQETLKDEQEGEDGAPEIETLPLFPMHGEDIHGYCNLRSDSSYYGGGWYHANEYGVKNNGSHRTSLELTLNSYTRRSPDSA 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0102 292 Gene3D - 27 93 - -
Lele50g0102 292 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 6 286 IPR044555 GO:0003700|GO:0099402
Lele50g0102 292 MobiDBLite consensus disorder prediction 134 151 - -
Lele50g0102 292 SUPERFAMILY Homeodomain-like 13 90 IPR009057 -
Lele50g0102 292 SMART HOX_1 25 93 IPR001356 GO:0003677
Lele50g0102 292 MobiDBLite consensus disorder prediction 1 28 - -
Lele50g0102 292 Pfam Homeodomain 27 88 IPR001356 GO:0003677
Lele50g0102 292 MobiDBLite consensus disorder prediction 87 151 - -
Lele50g0102 292 CDD homeodomain 28 90 IPR001356 GO:0003677
Lele50g0102 292 ProSiteProfiles 'Homeobox' domain profile. 23 89 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0102 Lele-ChrLele50 622265 623662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0102 21 241 Wox Gene Family AT2G17950 42.353 2.42e-49 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lele50g0102 Homeodomain 1.5e-17 CL0123