Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele50g0091 | ATGGCGGAGGAGAGATCAACTGGTGTGGTTCAGTGGTTCAGCTATTCTAAAGGCTTTGGCTTTATCAAGCCCGATGATGGAGGAAAAGATCTCTTTGTTCATCAATCTTCCATCAGATCCGAAGGATATCGTAGTCTGGTAGAAGGCGATCGCGTCGAGTTCGTGATTGTCTCCGGTGACAACGACAAAACCAAAGCCATCGATGTTACTGGCCCCAACGGAGCTCCTCTACAATCCAAGAAAGACAATTACGATGGTCGAGATGGGGGCTATAGCTTTAGCGGTGGATGGAGGGGTGGGGATAGGCGTAATAGCGGAGGAGCGAGCGGTGCTGGCTGTTATCAGTGCGGTGATGTCGGCCATTTAGCCAGAGATTGCAACCGGGGCAATAATGCCGGTGGCCCTTCTTGTTTTAAATGTGGTGAAGTTGGGCATTTGGCTAGGGACTGTTCACTTGGAAATAATGGCGGCGGCGGGGCTTGCTTTAGGTGTCATGAGTATGGGCACATGGCGAGGGACTGCACCAGGGGAAGCGGTGGGGGCGGTGGAGGTTGCTTCACATGTGGTGAAGTGGGTCACTTGGCCAGGGATTGCAACAAAGGAAGCGGAAGGCATGGCGGCAGTGGCGGCACCCAAGGAAATGCATGCTTTAATTGTGGGAAGCGTGGGCATTTTGCGCGAGAGTGCCCTGATTTTATCTACTTGTTGGCTCTTTTTGAAATTTATATATTGGTTGTTCGTGCAAAGGATTATGACTTTGGTTCTGGTTACATTGAGATAGATACATGGGCCCCTAGCATTTTTGAAACTGAGGCAGTGAAGTCTGTTCTCAGATCCCTCATACATTCTGAGATCTCTGGGGAGGCGGCTTCGATTAAGATTTACTGCTTTCACTGCTTTCTCGTGCGTTGGTCTTATGATCCGATGGATGATAATAGTCTCGAATCTGAAGATGCATCTGGGCCCGTTGATGTTTCTCAGAGTCAAACCGAAACAATCAGAGTAGCCCGTAGCAAAGGGTGTTCAGTCGAGATGGAGTGGGGAAAAATAAAATCAGGTGCATACGGAATAGCACGCAACCAGTTACTTGAGTTGTCACCATATATAGAGGTTGACCAGTCATGGCCTAAACCCTGTTGGTCCTTTGGATCTGCAACTGCTCTCATACATATCACTTTATTCCCTCCTCCTCCTAACCTTTTGTTCCAATCCTCGTATCTCTCGATCATGGCTTCTTCTGCTCCAATCGTTACCACCTTCTTCTCTCTCCTTCTCCTCCAATTCCTAACAGGTTCGTATTGTGCAACATTCACCATCGTCAACAAGTGCGGCTACCCGGTGTGGCCCGGCATTTTGTCCAACGCTGGAACTCCCCAACTCTCAACGACCGGTTTCGCCCTCCAACCGGGGGAATCCAACGCCGTCACCGTCCCCGCTGGGTGGTCCGGTCGCCTGTGGGGTCGTACCCTCTGCTCCCAGGACTCCGGCGGGAAGTTCTCCTGCGTGACCGGGGACTGCGGGTCCTCCGGCATAGAATGCGGGGGAGGCGGTGCCGCCCCACCTGCTACGCTGGCGGAGTTCACGCTGAACGGAGCAGGGGGGATGGACTTCTACGACGTGAGCCTGGTGGACGGTTACAACCTCCCGATGACGGTGGAGCCGCAGGGGGGCGCCGGGGGAGGGAACTGCACGTCGACAGGGTGCGTGGTGGATCTGAACGGGGCGTGTCCGACGGAGCTGAAGGTGACGTACGGGGCGAGCGGGGGGGAAGAAGGGGTGGCGTGCAAGAGCGCGTGCGAAGCATTCGGGGAGGCGGAGTACTGCTGCAGCGGGGCGTACGCGACTCCCCAAACGTGTAAGCCGAGCAGGTACTCGGCATTCTTCAAGGCGGCGTGCCCACGCGCTTACAGTTACGCGTATGACGATGGGACGAGCACCTTCACCTGCGCGGCTGCCGATTACGCGATCACATTCTGCCCCGGCCCCACCACAAGCTTGATGAAGGCGGGGAAGGAGAAATACGCAGAGGCGGCGGATGTATCGTCAGGGGGGCACGGTGGAGGTAGGTGGAGGATGCAATGGGTGTTGGGTGGAGTGATGGCGTTTTGGATGTTGAGTTGGCGTCTTGGTTGCCTCCGTTAG | 2142 | 0.5486 | MAEERSTGVVQWFSYSKGFGFIKPDDGGKDLFVHQSSIRSEGYRSLVEGDRVEFVIVSGDNDKTKAIDVTGPNGAPLQSKKDNYDGRDGGYSFSGGWRGGDRRNSGGASGAGCYQCGDVGHLARDCNRGNNAGGPSCFKCGEVGHLARDCSLGNNGGGGACFRCHEYGHMARDCTRGSGGGGGGCFTCGEVGHLARDCNKGSGRHGGSGGTQGNACFNCGKRGHFARECPDFIYLLALFEIYILVVRAKDYDFGSGYIEIDTWAPSIFETEAVKSVLRSLIHSEISGEAASIKIYCFHCFLVRWSYDPMDDNSLESEDASGPVDVSQSQTETIRVARSKGCSVEMEWGKIKSGAYGIARNQLLELSPYIEVDQSWPKPCWSFGSATALIHITLFPPPPNLLFQSSYLSIMASSAPIVTTFFSLLLLQFLTGSYCATFTIVNKCGYPVWPGILSNAGTPQLSTTGFALQPGESNAVTVPAGWSGRLWGRTLCSQDSGGKFSCVTGDCGSSGIECGGGGAAPPATLAEFTLNGAGGMDFYDVSLVDGYNLPMTVEPQGGAGGGNCTSTGCVVDLNGACPTELKVTYGASGGEEGVACKSACEAFGEAEYCCSGAYATPQTCKPSRYSAFFKAACPRAYSYAYDDGTSTFTCAAADYAITFCPGPTTSLMKAGKEKYAEAADVSSGGHGGGRWRMQWVLGGVMAFWMLSWRLGCLR | 713 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele50g0091 | 713 | SUPERFAMILY | Retrovirus zinc finger-like domains | 105 | 152 | IPR036875 | GO:0003676|GO:0008270 | |
Lele50g0091 | 713 | SMART | csp_8 | 7 | 72 | IPR011129 | GO:0003676 | |
Lele50g0091 | 713 | ProSiteProfiles | Zinc finger CCHC-type profile. | 161 | 176 | IPR001878 | GO:0003676|GO:0008270 | |
Lele50g0091 | 713 | Gene3D | - | 1 | 83 | IPR012340 | - | |
Lele50g0091 | 713 | SUPERFAMILY | Retrovirus zinc finger-like domains | 202 | 232 | IPR036875 | GO:0003676|GO:0008270 | |
Lele50g0091 | 713 | PRINTS | Cold shock protein signature | 29 | 38 | IPR002059 | GO:0003676 | |
Lele50g0091 | 713 | PRINTS | Cold shock protein signature | 8 | 23 | IPR002059 | GO:0003676 | |
Lele50g0091 | 713 | PRINTS | Cold shock protein signature | 44 | 62 | IPR002059 | GO:0003676 | |
Lele50g0091 | 713 | ProSitePatterns | Cold-shock (CSD) domain signature. | 19 | 38 | IPR019844 | - | |
Lele50g0091 | 713 | SMART | c2hcfinal6 | 215 | 231 | IPR001878 | GO:0003676|GO:0008270 | |
Lele50g0091 | 713 | SMART | c2hcfinal6 | 160 | 176 | IPR001878 | GO:0003676|GO:0008270 | |
Lele50g0091 | 713 | SMART | c2hcfinal6 | 136 | 152 | IPR001878 | GO:0003676|GO:0008270 | |
Lele50g0091 | 713 | SMART | c2hcfinal6 | 112 | 128 | IPR001878 | GO:0003676|GO:0008270 | |
Lele50g0091 | 713 | SMART | c2hcfinal6 | 184 | 200 | IPR001878 | GO:0003676|GO:0008270 | |
Lele50g0091 | 713 | Pfam | Thaumatin family | 441 | 660 | IPR001938 | - | |
Lele50g0091 | 713 | SUPERFAMILY | Osmotin, thaumatin-like protein | 435 | 661 | IPR037176 | - | |
Lele50g0091 | 713 | Gene3D | - | 105 | 156 | - | - | |
Lele50g0091 | 713 | Gene3D | - | 208 | 231 | - | - | |
Lele50g0091 | 713 | Gene3D | - | 180 | 207 | - | - | |
Lele50g0091 | 713 | Gene3D | - | 157 | 179 | - | - | |
Lele50g0091 | 713 | ProSiteProfiles | Thaumatin family profile. | 435 | 660 | IPR001938 | - | |
Lele50g0091 | 713 | ProSiteProfiles | Zinc finger CCHC-type profile. | 185 | 198 | IPR001878 | GO:0003676|GO:0008270 | |
Lele50g0091 | 713 | SUPERFAMILY | Retrovirus zinc finger-like domains | 153 | 201 | IPR036875 | GO:0003676|GO:0008270 | |
Lele50g0091 | 713 | ProSiteProfiles | Zinc finger CCHC-type profile. | 113 | 126 | IPR001878 | GO:0003676|GO:0008270 | |
Lele50g0091 | 713 | ProSiteProfiles | Zinc finger CCHC-type profile. | 216 | 231 | IPR001878 | GO:0003676|GO:0008270 | |
Lele50g0091 | 713 | ProSiteProfiles | Cold-shock (CSD) domain profile. | 5 | 71 | IPR002059 | GO:0003676 | |
Lele50g0091 | 713 | PANTHER | OS03G0233200 PROTEIN | 421 | 660 | IPR001938 | - | |
Lele50g0091 | 713 | Pfam | Zinc knuckle | 215 | 230 | IPR001878 | GO:0003676|GO:0008270 | |
Lele50g0091 | 713 | Pfam | Zinc knuckle | 160 | 175 | IPR001878 | GO:0003676|GO:0008270 | |
Lele50g0091 | 713 | Pfam | Zinc knuckle | 136 | 151 | IPR001878 | GO:0003676|GO:0008270 | |
Lele50g0091 | 713 | Pfam | Zinc knuckle | 184 | 199 | IPR001878 | GO:0003676|GO:0008270 | |
Lele50g0091 | 713 | Pfam | Zinc knuckle | 112 | 126 | IPR001878 | GO:0003676|GO:0008270 | |
Lele50g0091 | 713 | SMART | tha2 | 437 | 660 | IPR001938 | - | |
Lele50g0091 | 713 | CDD | CSP_CDS | 7 | 71 | IPR002059 | GO:0003676 | |
Lele50g0091 | 713 | CDD | TLP-PA | 436 | 659 | - | - | |
Lele50g0091 | 713 | Pfam | 'Cold-shock' DNA-binding domain | 7 | 71 | IPR002059 | GO:0003676 | |
Lele50g0091 | 713 | FunFam | THAUMATIN-LIKE PROTEIN 1 | 435 | 660 | - | - | |
Lele50g0091 | 713 | Gene3D | Thaumatin | 435 | 660 | IPR037176 | - | |
Lele50g0091 | 713 | PRINTS | Pathogenesis-related protein signature | 650 | 659 | IPR001938 | - | |
Lele50g0091 | 713 | PRINTS | Pathogenesis-related protein signature | 436 | 448 | IPR001938 | - | |
Lele50g0091 | 713 | PRINTS | Pathogenesis-related protein signature | 536 | 552 | IPR001938 | - | |
Lele50g0091 | 713 | PRINTS | Pathogenesis-related protein signature | 484 | 495 | IPR001938 | - | |
Lele50g0091 | 713 | ProSiteProfiles | Zinc finger CCHC-type profile. | 137 | 150 | IPR001878 | GO:0003676|GO:0008270 | |
Lele50g0091 | 713 | SUPERFAMILY | Nucleic acid-binding proteins | 4 | 74 | IPR012340 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele50g0091 | Lele-ChrLele50 | 572102 | 577669 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele50g0091 | 417 | 705 | Receptor kinase-like Gene Family | AT5G38280 | 46.897 | 4.60e-86 | 283 |