Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0076 ATGGCGCCCCCTCAAGTTGACGATGAATATAACAAGCAGATAAAAAATGCTCGTAAACAACTTGACAAACTCATCTCTGACACCAAGAAACATGCTCCCCTCCTGCTTCATTTGGCGTTGCATGACGCTGGGATATACGGTAATGTTACCGGTACTGACTATTATTTGATAAAACGAGGTCCCAATGGTTCAATAAGAACTCAGGAGGAGTTGAAATATCCCCCAAATGGGTCTTTGAGTGAAGCCGTGAAGCTTTGCGAGAAAGTGAAGGATAAGAATCAGAAAATCACGTATGCGGACCTATACCAGCTTGCTGGTGTTGCGGCTGTTAAGATCACCGGCGGCCCCACTATTGAATTTGTTCCCGGCAGAGAGGATTCTACACAGTATCCAGAAGAAGGCCGGCTACCTTCGAATGAAGGCCTAGATGTATCACAATTGGAGAAAATCACAAAACGCATGGGTCTCGAAGAAAAAGACATGGTGGCATTGTTTGGCGGCCTCTACCAATTGAATCTGCCACCTGCAAGAGCAGAAGACACTAGCGGCCCAGGGATAACTCCTGATGACCAAAGAACTGACTTCAAGTTTGACAACTCGTATTTTATAGATCTGGAGAAGAAGAAGGATGAAGCGGATAATAAAAACCCTTTATTAAAGGGTGCAGGATTCCGCAAGTGGGTAGAAACTTACGCAAAGGATAAGGGTGTTTTCTTGAAGGATTATGCGGCGGCGCACAAGAAAGTATCGGAGCTAGGAATGAGCGTAGCGACGTCAGGGAAAGGGGACACAACACAAACTGATCCCAAGTCTTCAGCTTATGGTGCTCGGAATCGAGTGAGATTGGTGCAGGGCATCGGAATTGCTGTCGTCACCACCGCTATCATCCTCGGTTTCTTCTTGAGCAGAAGAACCAAATGA 921 0.4625 MAPPQVDDEYNKQIKNARKQLDKLISDTKKHAPLLLHLALHDAGIYGNVTGTDYYLIKRGPNGSIRTQEELKYPPNGSLSEAVKLCEKVKDKNQKITYADLYQLAGVAAVKITGGPTIEFVPGREDSTQYPEEGRLPSNEGLDVSQLEKITKRMGLEEKDMVALFGGLYQLNLPPARAEDTSGPGITPDDQRTDFKFDNSYFIDLEKKKDEADNKNPLLKGAGFRKWVETYAKDKGVFLKDYAAAHKKVSELGMSVATSGKGDTTQTDPKSSAYGARNRVRLVQGIGIAVVTTAIILGFFLSRRTK 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0076 306 Gene3D - 18 253 - -
Lele50g0076 306 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 5 257 IPR044831 GO:0004601|GO:0034599
Lele50g0076 306 Coils Coil 7 27 - -
Lele50g0076 306 SUPERFAMILY Heme-dependent peroxidases 23 256 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele50g0076 306 Gene3D Peroxidase, domain 2 137 246 - -
Lele50g0076 306 Pfam Peroxidase 18 234 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele50g0076 306 PRINTS Haem peroxidase superfamily signature 96 113 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele50g0076 306 PRINTS Haem peroxidase superfamily signature 114 126 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele50g0076 306 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele50g0076 306 PRINTS Haem peroxidase superfamily signature 32 46 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele50g0076 306 ProSiteProfiles Plant heme peroxidase family profile. 18 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele50g0076 306 PRINTS Plant ascorbate peroxidase signature 154 175 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele50g0076 306 PRINTS Plant ascorbate peroxidase signature 10 30 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele50g0076 306 PRINTS Plant ascorbate peroxidase signature 114 126 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele50g0076 306 PRINTS Plant ascorbate peroxidase signature 230 254 IPR002207 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0076 Lele-ChrLele50 499102 500924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0076 30 249 Peroxidase AT4G16270 27.413 9.67e-13 66.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0076 50 499102 500924 Lele51g0074 51 438556 445957 hybridization
Lele50g0076 50 499102 500924 Lele52g0076 52 476999 478594 hybridization