Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele50g0058 | ATGGATTTTGTGGCGAATCCTTTTCCTGTGCCCTCTTCCTTGCTGGGCTCCTTTGGGAGCTTCGCTGAGAGGGTTAGACACATGAGCAGCCTCGCAGTTTCTGTTATTATTGGAAACATCTTCTCTGCGATCTTGACATTTTGCTTTGCCTTAGTGGGAACATTATTGGGTGCCATGACGGGAGCTTTGATAGGCCAAGAGACTGAGAGCGGCTTTATTAGAGGAGCAGCAGTTGGTGCCATATCTGGAGCGGTTTTCTCCATTGAAGTATTTGAATCTTCTCTTGTTCTTTGGCAATCTGATGAATCTGGGATTGGGTGCCTCTTATATCTGATTGATGTCATTGCTAGCCTACTGAGTGGGAGACTTGTGCGAGAGAGGATTGGCCCTGCCATGTTAAGTGCCGTCCAAAGTCAGATGGGTGCTGTTGAAACAAACTTCGAGGAAGTTCAAAATATCTTTGACACTGGTGGTTGCAAGGGTTTAACAGGAGATTATGTTGAAAAGATCCCAAAGATCACAATCACAAATGATAATAATATCGATGCTTGGGGTGAAAGAGTTTCTTGTTCAGTCTGCCTCCAGGACTTTCAGGCTGGAGAGACAGTCAGAAGTTTGCCTCATTGCCATCACATGTTCCACCTACCATGCATAGATAAGTGGCTCTTCAGGCACGGTTCATGTCCGTTATGCAGAAGGGATCTAGTGTCCCTGCTCCAAGTTTGGTTTCTTTATTCAAAATTAGGCATTGTGAAACGATTCGTCCATTCCAATCGGAAGAACGGGAAGTGTGAGAGACAAAATTCAGGAAAAACGGAATCCAAAGAGTCAGGAAGTGTTCATGAAGTTCAGACAACGGGTCTCAATGATTTTGAATTCCCAGTCAAATCCATTAAAAAGAAACAGCCACTAATTTCATACAAATGTTCTGATTTCACCCGAGTAGGTTTTATTCTTGATTTTTTAATGGACACTTGCTTTTTGCCTAAAGTTGTTTATGTTCATGCGATTATCTTCGCATGCGTGATGGGGACCTTTGGCAGTTTTGGCTTATATGCCTCCAAAGATAAGACCAAAAAGGGTACTCTGCTTAAATGCAAGAGGGGTTTGAAAGGTGCAAAAGATGGAAAGAGTTTGAAATATGATAAGACATCGTTGAGGCGTTTTGATTTGGAGGAGCTAGAGAAGGCTTCAAATAATTTTAGCCCAGATTGCATGCTGGGTTCTGGTGCATTTGGAATGGTGTATAAAGGAACCTTTGAATTAGAAGGAACCTTAGCCATTAAAAGAGCTCATGGTGAACCATTCTTAAGCAGGGAAGAGTTCAGAAATGCAGAAGTGAGCCTCATTCCGAAAGTAAATCACAGGAATCTTGTTAATTTGGTGGGATATTGTGAAGAACCTGGTGATGGGGTCCAAATACTGGTTTATGAGTATGTGCCTAATGGTTCTCTGCTCGTGTGCATGATGGGAAAAAGAGGGAAGAGCTTTACTTGGAGGCAAAGAGTAACCATAGCAATAGGAGCAGCTAAAGGGGAAAGGTTAGAGGCTGAAGTTTCAGATTTTGGGTTGATAAAATCAGGACCAACTGGGGATCAATCTCATGTTAGCAGCCAAATCAAAATAACCCCAGGATACCTTGATCCCACTTATTGTTCAACCTTTCATTTGACCACTTTCAGTGACGTTTATATTTTCGGTGTCATACTTCTCCAACTTATTTCTACTGGACCAGCGGTTGATCCCACAAAAAATCAAAATATTTCTCATATTTGTGATCAGTTAAGTCGTGCAAGGCCTAGCTTAGAGAAGGGTAATGTTGAAGAAATTATAGATGCCAATTTACTATGTGAGCCTTGCAATATGAAGGTTATGTTGAAGATGGGTCAGCTTACCCTCCGATGTGGGGCTCGAGTGCCAAAGCATCGTCCTACAATGACTCAAGTGTGCCAAGAGCTACAAGAAGCTCTTCATGCAGCTGATAACTTGATTGGCAAACTACCTTCGAAAAAATTAAAAAAATCAAGTGGCACATCTCAAGAATTAACGGAACCAGAGATTCTCAAATCTATAGAAAACTATGCCCGTTCACAGAGTTTTGTAAGCATAGATGGTGTTGGATTCCAGAAGTTTCATATTGATATGGATAGTTTATCCTTTCAAAGTACAAACTTAAGATGCCTAGAAACTAATAGTATTAGTATTGATACTGATGTCAACACTTTGAGGAGAATTCAAGAAGATATATAA | 2250 | 0.4124 | MDFVANPFPVPSSLLGSFGSFAERVRHMSSLAVSVIIGNIFSAILTFCFALVGTLLGAMTGALIGQETESGFIRGAAVGAISGAVFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPAMLSAVQSQMGAVETNFEEVQNIFDTGGCKGLTGDYVEKIPKITITNDNNIDAWGERVSCSVCLQDFQAGETVRSLPHCHHMFHLPCIDKWLFRHGSCPLCRRDLVSLLQVWFLYSKLGIVKRFVHSNRKNGKCERQNSGKTESKESGSVHEVQTTGLNDFEFPVKSIKKKQPLISYKCSDFTRVGFILDFLMDTCFLPKVVYVHAIIFACVMGTFGSFGLYASKDKTKKGTLLKCKRGLKGAKDGKSLKYDKTSLRRFDLEELEKASNNFSPDCMLGSGAFGMVYKGTFELEGTLAIKRAHGEPFLSREEFRNAEVSLIPKVNHRNLVNLVGYCEEPGDGVQILVYEYVPNGSLLVCMMGKRGKSFTWRQRVTIAIGAAKGERLEAEVSDFGLIKSGPTGDQSHVSSQIKITPGYLDPTYCSTFHLTTFSDVYIFGVILLQLISTGPAVDPTKNQNISHICDQLSRARPSLEKGNVEEIIDANLLCEPCNMKVMLKMGQLTLRCGARVPKHRPTMTQVCQELQEALHAADNLIGKLPSKKLKKSSGTSQELTEPEILKSIENYARSQSFVSIDGVGFQKFHIDMDSLSFQSTNLRCLETNSISIDTDVNTLRRIQEDI | 749 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele50g0058 | 749 | MobiDBLite | consensus disorder prediction | 261 | 282 | - | - | |
Lele50g0058 | 749 | SMART | ring_2 | 190 | 231 | IPR001841 | - | |
Lele50g0058 | 749 | CDD | RING-H2_PA-TM-RING | 190 | 232 | - | - | |
Lele50g0058 | 749 | SUPERFAMILY | Protein kinase-like (PK-like) | 386 | 670 | IPR011009 | - | |
Lele50g0058 | 749 | Gene3D | Transferase(Phosphotransferase) domain 1 | 480 | 671 | - | - | |
Lele50g0058 | 749 | MobiDBLite | consensus disorder prediction | 261 | 278 | - | - | |
Lele50g0058 | 749 | ProSiteProfiles | Zinc finger RING-type profile. | 190 | 232 | IPR001841 | - | |
Lele50g0058 | 749 | ProSiteProfiles | Protein kinase domain profile. | 401 | 657 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lele50g0058 | 749 | ProSitePatterns | Protein kinases ATP-binding region signature. | 407 | 429 | IPR017441 | GO:0005524 | |
Lele50g0058 | 749 | Pfam | Ring finger domain | 189 | 232 | IPR001841 | - | |
Lele50g0058 | 749 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase | 373 | 479 | - | - | |
Lele50g0058 | 749 | SUPERFAMILY | RING/U-box | 184 | 238 | - | - | |
Lele50g0058 | 749 | Pfam | Protein tyrosine and serine/threonine kinase | 517 | 653 | IPR001245 | GO:0004672|GO:0006468 | |
Lele50g0058 | 749 | Pfam | Protein tyrosine and serine/threonine kinase | 406 | 512 | IPR001245 | GO:0004672|GO:0006468 | |
Lele50g0058 | 749 | FunFam | NEP1-interacting protein-like 1 | 150 | 235 | - | - | |
Lele50g0058 | 749 | Gene3D | Phosphorylase Kinase; domain 1 | 373 | 479 | - | - | |
Lele50g0058 | 749 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 155 | 237 | IPR013083 | - | |
Lele50g0058 | 749 | PANTHER | NEP1-INTERACTING PROTEIN-LIKE 2 | 20 | 234 | IPR044523 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele50g0058 | Lele-ChrLele50 | 404352 | 410937 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele50g0058 | 20 | 235 | C3H Transcription Factor Family | AT5G66070 | 76.852 | 8.85e-112 | 336 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-I-1 | Lele50g0058 | PK_Tyr_Ser-Thr | 2.1e-07 | CL0016 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele50g0058 | 50 | 404352 | 410937 | Lele51g0056 | 51 | 341663 | 343175 | hybridization | |
Lele50g0058 | 50 | 404352 | 410937 | Lele52g0058 | 52 | 382878 | 384414 | hybridization |