Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0049 ATGGCGATCGAGGAGGACCTTGAGAGCTGTGGGAGCAGAGCTTGTGTACAGTCACCGCAAGCTCATCCTCGTCAACGTAGGAAGAAATTGGAGGTGTACAATGAGGTGCTCCGTCGAATTCAAGAGTTAAATTGTGAGGAGGCCAATGTTCCGGGGTTTGATGACCTGCTCTGGCTTCATTTCAATCGTCTTCCTTCTAGGTACGCATTGGATGTGAATGTGGAGAGGGCAGAAGATGTTCTTAGTCACAAGAGATTGCTCAAGTTGGCAGAGGACCCTACCAATCGACCTGTATTTCAAGTCCGCTCGGTACAGGTATATCCTTCTGGATGTGCTAATTTTGCTGACTCAATGCATTCCGATCCTTCTGAGAAAGAAGATGCGCAGAGTTCTTTTAACTATTCTTTTAAGCAGGGACTTCATCCACCACCTACTTTTGGCTCATCTTCTAATCTCGAAGCTCTTTCCCGCCAAGCATGTAAAAATAATGTTGAAGATGGGGATGGGGATATGGATTCGACACCACGCTTTTACAGGGTGTGGAGAAGGCCCATGCACGAGATTACCTTTTCAACTGTTGACAAGCCTAAAGTCCTTAGTCAGAGCATTTCTAGCCACATTGTTAACGTCATGCAAGAAAGGAATCTGACCTATCTTTGCCTTTTGCATGAGCTGGTGACGTATTTCTTGAAATCTACTACAAATGCCTCCAAATATAGACATTGTAAAACTAGTTGTTGGAAGTTTTCTTTGAAAAGTGTCACAACTTTCCTGAGTACATGTTTTGCCCAAATAGACCATATGGGACTGAACATTCAAGAAGCTCATGCATTTTCCACTACAGATGGATTTTCTCTCGATGTCTTTGTTGTTGAAGGGTGGCCAAATGAGGAAACTGAGGAGCTTAAACGTCTACTGGAAAAGGAAATTTTGAAGTTTAAGTTTATTAGAACTGTAGGTAGCATCTTATCTGATCTTTCTCTCTTTTCCCCTTCTCTGAGCTTATCCAGGTACAGAGGTATTTATTGCAGCCAAGATGTAGCTATCAAAGTCCTTAAGCCTGACAAAATAAATACAGAGATGTTGAGAGAATTTGCCCAGGAAGTTTATATCATGAGGATGTCAATTGTTAAACTCTCCTGCTCAAAGGTCCACGAACTTTGGTTTAGTAGCAAACATATCATGGGAAAATTCGACACAAGAATGTTGTGCAGTTCATTGGAGCATGCACTCAACCACCAAATCTGTGTATTATTACTGGTGGTAAAGGTTGCTGATTTTGGAGTTGCCAGAGTGCAAACTCAATCTGGAGTGATGACAGCTGAAACTGGAACATACCGTTGGATGGCTCCTGAGGTCATTGAACACAAACCGTATGACCAGAAGGCTGATGTTTTTAGTTTTGGAATAGCTCTCTGGGAGCTTCTAACAGGCGAATGCCTACGACCTTCAATCCCCAAGAATGCACACCCAAGGCTTTCTGAACTGCTCCAGCGATGTTGGCAACAAGATCCAATTGAGAGACCAAACTTCTCAGAAATATTGGAAATTCTTCAGCAGATAGCAAAGGAGGTAAAACACTAG 1584 0.428 MAIEEDLESCGSRACVQSPQAHPRQRRKKLEVYNEVLRRIQELNCEEANVPGFDDLLWLHFNRLPSRYALDVNVERAEDVLSHKRLLKLAEDPTNRPVFQVRSVQVYPSGCANFADSMHSDPSEKEDAQSSFNYSFKQGLHPPPTFGSSSNLEALSRQACKNNVEDGDGDMDSTPRFYRVWRRPMHEITFSTVDKPKVLSQSISSHIVNVMQERNLTYLCLLHELVTYFLKSTTNASKYRHCKTSCWKFSLKSVTTFLSTCFAQIDHMGLNIQEAHAFSTTDGFSLDVFVVEGWPNEETEELKRLLEKEILKFKFIRTVGSILSDLSLFSPSLSLSRYRGIYCSQDVAIKVLKPDKINTEMLREFAQEVYIMRMSIVKLSCSKVHELWFSSKHIMGKFDTRMLCSSLEHALNHQICVLLLVVKVADFGVARVQTQSGVMTAETGTYRWMAPEVIEHKPYDQKADVFSFGIALWELLTGECLRPSIPKNAHPRLSELLQRCWQQDPIERPNFSEILEILQQIAKEVKH 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0049 527 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 337 523 - -
Lele50g0049 527 Pfam Protein tyrosine and serine/threonine kinase 421 518 IPR001245 GO:0004672|GO:0006468
Lele50g0049 527 Gene3D Transferase(Phosphotransferase) domain 1 402 527 - -
Lele50g0049 527 ProSiteProfiles Protein kinase domain profile. 251 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g0049 527 Gene3D Phosphorylase Kinase; domain 1 334 385 - -
Lele50g0049 527 SUPERFAMILY Protein kinase-like (PK-like) 344 521 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0049 Lele-ChrLele50 333041 341623 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0049 1 525 MAP Kinase Kinase Kinase AT4G35780 45.307 2.89e-148 435
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lele50g0049 PK_Tyr_Ser-Thr 3.8e-19 CL0016