Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0028 ATGGAGCTGTATATTCACTTTTCTAAGTATCCAGTTTCGGAGGATGATATTTGGTATAATGGCAGTTTGACAGAGGTTCTAGCTACAAAAGCGCGGATATGCAAAGGGGTTGTGCCTGTTAATTCGTTTAGCGTGAGTGGTGACGGGGCCTATTTGCTGATCACTCTTCTAGTGTTCCAGAACACCATTAAAGAAGAGTTGATCAGGAGCGTGCATGTCTACCGACTGAGGGATGGGAGGGAAAACGTGGTTGAAAGAGAGTTTGTATTTTCACGGAGTGGTTCATACGGAGAAATGCGGGCTACCCCAATTCTTAGCTTACAGAAATTTCGTGCTTCCGAAGTTTTCGAAGGGTATCAGAATGGAGTATGGCTTTGCGTCTTTGCGTTTCACGCCGGTCACAAGCCTCAGTGTTCCCGCGTTCCTCGGTTGTTATCAGTCTCGAGGAATCCCAAGCTTCAGATGATCCCAACATTGCTTAATGATCTCCATATGGTACATGAGTTGAACTGTAAATCAAAAGAGAATGATATGCTGCAAATCTATCCCGATGAAAGATGCCAAGGAAACAGCAATGATGGCCATCAGCCAAGAAAATTTTTTCTGCAGGATCTCAATTGTCTTCCTTATCCAGATGACATGCCTGAGTTACAAGACAAGGAAGCAGATGAAGAAAGTTTAGGCATGTCTGAGATTCCAGGGAATGAATCAGATGATGAAAGTTTAGACCCAGCTGAGTTACCAGACAATGACATCATTGACGAAAGTTTGCCAGGCAGCATGGAGAAGAAAAAGAGGGCAGCTAGTAAAGATGTAGCAAGCATTGGTTTAGCAGATCTGGTGAAGTACTTTGATGTGCCAATTGTAGAAGCATCAAGAAATCTAAAAAAGTACATACAGGAAGTGGCAGAAAATGAAGAAATAGAGAATGAGGCTGCTGTTATGGCTGTGACTAAGAGGCAAAAGATGCTCGAGTGTGAAAAAGAAATTATTGAGAGTAAACCCTCTATGGACATCCAAAGAGAAACCAAGAGATTCAGGCAGGATATCACTGAAATCGATCCAGTTCCGCTTCTAATAATTATAAAAGCATACTTGTTCCTTTTTGACCTGGAGACATTTGAAGCTCAGCCAACGCAAGACGATTTCCAGCCAGAAATTCTACTTGTTATGAAACAGTGTGGGCTTGGACTTGGGGGTAGTATTGTGGGGAAGATTGCTGCTTCACTGGAACAGTGGAAATGGTGTAAGTTTCCATTTCGTTTAATTCTTTCTACAAATGTATGGATTGGGGAGCAGTGA 1302 0.4255 MELYIHFSKYPVSEDDIWYNGSLTEVLATKARICKGVVPVNSFSVSGDGAYLLITLLVFQNTIKEELIRSVHVYRLRDGRENVVEREFVFSRSGSYGEMRATPILSLQKFRASEVFEGYQNGVWLCVFAFHAGHKPQCSRVPRLLSVSRNPKLQMIPTLLNDLHMVHELNCKSKENDMLQIYPDERCQGNSNDGHQPRKFFLQDLNCLPYPDDMPELQDKEADEESLGMSEIPGNESDDESLDPAELPDNDIIDESLPGSMEKKKRAASKDVASIGLADLVKYFDVPIVEASRNLKKYIQEVAENEEIENEAAVMAVTKRQKMLECEKEIIESKPSMDIQRETKRFRQDITEIDPVPLLIIIKAYLFLFDLETFEAQPTQDDFQPEILLVMKQCGLGLGGSIVGKIAASLEQWKWCKFPFRLILSTNVWIGEQ 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0028 433 MobiDBLite consensus disorder prediction 212 265 - -
Lele50g0028 433 Coils Coil 288 308 - -
Lele50g0028 433 MobiDBLite consensus disorder prediction 236 250 - -
Lele50g0028 433 PANTHER PROTEIN RKD4 165 296 IPR044607 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0028 Lele-ChrLele50 204825 211400 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0028 63 349 AtRKD Transcription Factor Family AT4G35590 35.976 7.47e-47 162
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0028 50 204825 211400 Lele51g0026 51 171775 183333 hybridization
Lele50g0028 50 204825 211400 Lele52g0030 52 196054 204291 hybridization