Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0022 ATGGGAGGCTTATTGCGCATTTTTGAGTTCAATCAGGGGAGCATGGCCAAGAAAGTTCATGCCCACAAGAGACGTCATGGTGCCCTGGAACCTACTTGCAATAACCTGGAGCTTCAAGTTGAAGCATCTCAAATTCACTGCCCGCAAGGAGAATTACCGAAGGAAGTGAATGGAAGGGGTTCAGGTGGTCGGGGTTCGGGCTACTCAAATTCTTGTGGCCATATGGAATTTGACTCTTATTACCAAGACACAGATGATGATGATGGATGGAACCAATGTTTGGGAAAACCAAAGCCCCGGGAGCATCCTCAGGAAGAGGAACTACAGAAGTTCAAGAAAGAATTTGAAGCATTTCGAGCGGCAAGGTTAATGGAGTGTTCGAAGGTTGTTGACGTTGGCAATACTCCCAGACAATTGCTTGCACGAGAGAGCATGAGCAAGAAAAAGATGGCAGATCATGCAACTTCACATAAACTGGCTACAGAGTCACCAAATAATGGTGGTCCTGCATATCATGGTAATATCAAGGAAACCTTTCCTACTAGGCACAAGGAAACCTTTCCTTCAAGGAGCAGAACCTTAAGTAGAGACTTTGAGGAGTCATTAATGATGAAATTGAACAGCCGACTGGATGGTTCTTCACCAACTCGAATAGTAATTTTGAAGCCTGGTCCTGATAGGATTAACAGCCATGAGGATAATTGGATCAATCCATCCAGCACTTTACAAGGTAGAAATAGCATAGAAGATTTTCTCGAAGAGGTTAGACAGCGGCTAAAATGCGAACTGCAGGAGAATACTTTTAAAAAGGGTTATGTGGTTCGAGGAAGTGGGATTGAGACACCTTACAATGAAAAGCCATCATATCCTAAACAAATTGCTCGTAGCATTGCAAAGCAGGTCAGAGAAAGCGTGACTAGAGATGTTGCAACAATGCCCCGCTCAGAGTCAACAAGATCATACAGAAGTGAAATTCAGTTCAGTGGATCAAGTTCCCCAGAATTTATCAATATAGATACCAGGAGACTCTTGTCAGATAGGCTAAGAAATGTTCTAAAAAGCAAAGCTTATCTTGATATTCCTGAAGTGACTTGCTGGAATTCAAGGTCATATCTCTTAGATAATCACAATGACATGTTAAAACAAGCTAATGATAGTATGATTCCAAATGATTTGAGCCACTGGGAAATTTCAAAAGAGGAAAAAGAAATGCGAACAGGCTCTTTCAGGTGTGAACCAGTTGACAATATATCGCTCCCCAAAGAATTGTCCCCTAGAAACCTTGTTAGATCCTTGTCTGCTCCTGTATCAGGAACATCATTTGGAAAGCTTCTTCTTGAGGACCGCCGTATTTTAACTGGTGCCCAAATTCGGAGGAAGCTTGAAGCCATTGAAACTGTGTCTGTTGATGTTAAAAGGAAAAAGAAGGATAGATTTAACATTAAGGAAAAGGTTTCCAATTTTAGATATAATCTTGTACTAAGAGGGAAGCTGTTTGGAAAAAAAATTCAATCAATGGTGGAATCACATAGCAGTGAAGATGGTCCCATGATGGGAGATGTTACAAGTGGACCAACAGTTCTTTTGAATTGTGGTGAGAGGCATGAGAACTTCACTGAGGTCCCTCCCAGTCCTGCATCTGTATGCAGCAATGCTCAGGAAGAGATATGGAAGCGAGCTGAATATTTAAGTCCAATTTCAACTCCGGATATATCTTCAAGAGATGGTAACGCTATGCCAGAGGCTTTTAGAGAAATTAGCGCCGGTTTGAATGAGTTAAGGAGGCAGATAAATCAACTTGAGTCTGATGGCCCTGAGGAATTAATGGTCAAACAGGAGCCTGAAGAATCTGAGTTGGCACAATTAGAGGATCCAGCAGAATCTTACATAAGAGATCTGCTTGTTTCTTCTGGTATATACTTCGGTTCATGGGATAAATCCTTAATAAAAGGGAACACATTTGCAAAGCCTATTGGGAACTCTGTTTTTGAAGAAGTGGAGGAGTCTCATAACAAAATGCTCAAGGAGGACGAAACTTGTACCAAGGATCAAAGTGAAAATAAGTTAGAGCACAAGCTATTGCATGATTTGCTAAATGAAGCACTTGTCATTGTTCTTGGACCACCTTTAACGTTGTCTACATTCAGAAGGGAACTATGCAGTTCCTCCTCCGCGCCGCCGCCACCACCACGTGGGAAGGAGCTTCTGAAGTTAGTATGGGAAATCATCAGATTTTCCTTATATCCACTGTCTGACATAACTTCTGATTCACTTGATACGTGGGTAGCCAGAGACCTGGGATCCAACCCCTGGGTTGGATTGATAGACGATGAGCTTCATATACTGGAAAGAGAGATAGAACGTCTGGTTACTGAAGATCTGGTTGAAGAATTCATGAGGGATATGATATGCTCTTAG 2418 0.4202 MGGLLRIFEFNQGSMAKKVHAHKRRHGALEPTCNNLELQVEASQIHCPQGELPKEVNGRGSGGRGSGYSNSCGHMEFDSYYQDTDDDDGWNQCLGKPKPREHPQEEELQKFKKEFEAFRAARLMECSKVVDVGNTPRQLLARESMSKKKMADHATSHKLATESPNNGGPAYHGNIKETFPTRHKETFPSRSRTLSRDFEESLMMKLNSRLDGSSPTRIVILKPGPDRINSHEDNWINPSSTLQGRNSIEDFLEEVRQRLKCELQENTFKKGYVVRGSGIETPYNEKPSYPKQIARSIAKQVRESVTRDVATMPRSESTRSYRSEIQFSGSSSPEFINIDTRRLLSDRLRNVLKSKAYLDIPEVTCWNSRSYLLDNHNDMLKQANDSMIPNDLSHWEISKEEKEMRTGSFRCEPVDNISLPKELSPRNLVRSLSAPVSGTSFGKLLLEDRRILTGAQIRRKLEAIETVSVDVKRKKKDRFNIKEKVSNFRYNLVLRGKLFGKKIQSMVESHSSEDGPMMGDVTSGPTVLLNCGERHENFTEVPPSPASVCSNAQEEIWKRAEYLSPISTPDISSRDGNAMPEAFREISAGLNELRRQINQLESDGPEELMVKQEPEESELAQLEDPAESYIRDLLVSSGIYFGSWDKSLIKGNTFAKPIGNSVFEEVEESHNKMLKEDETCTKDQSENKLEHKLLHDLLNEALVIVLGPPLTLSTFRRELCSSSSAPPPPPRGKELLKLVWEIIRFSLYPLSDITSDSLDTWVARDLGSNPWVGLIDDELHILEREIERLVTEDLVEEFMRDMICS 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0022 805 MobiDBLite consensus disorder prediction 305 324 - -
Lele50g0022 805 Pfam Domain of unknown function (DUF4378) 628 797 IPR025486 -
Lele50g0022 805 MobiDBLite consensus disorder prediction 310 324 - -
Lele50g0022 805 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 55 803 - -
Lele50g0022 805 Coils Coil 583 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0022 Lele-ChrLele50 176244 180011 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0022 97 804 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 41.224 1.64e-141 432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0022 50 176244 180011 Lele53g1238 53 21026938 21028062 CCT
Lele50g0022 50 176244 180011 Lele54g1210 54 17657816 17658955 CCT
Lele50g0022 50 176244 180011 Lele55g0248 55 1514125 1515249 CCT
Lele50g0022 50 176244 180011 Lele56g0235 56 1885760 1886899 CCT
Lele50g0022 50 176244 180011 Lele51g0021 51 136128 139947 hybridization
Lele50g0022 50 176244 180011 Lele52g0023 52 164013 167781 hybridization