Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0021 ATGCCGAGCATAAGGCCTTTACCTGAGGATGTTCGTAGTTCATTGCGTTCTGGCATTTTCTTGTTCGACTTGACCAGGGTTGTGGAAGAACTGGTTTTCAATAGCCTGGATGCTGTCGCAACCAAGGTCTCAGTCTTTGTTAGTGTCAGGAGCTGTTACATAAAAGTAGTGGATGATGTTGATGCTCTCATACTTCTTTTCTCATTTGTTGGTTTAAATTGTGTGAATCTAATTTCCCGAGTTGCCTTTGATAATGGGATGTATCATATGTACATTGTACAAGCAGCAACATCGAAGTTACTTAGTTTGGCTGATCTGAATGACACAAGTGGAAGCTTTGGTTTTCGAGGGGAAGCTTTAGCTTCAATTTCAGAAGTTTCGCTGTTGGAAATTTGGACAAGAACTTTTGGAAGGGCAAATGGATACAGCAAAGTATTGAAGGGCTGCAAGTGTCTATATCTCGGCATAGATGATGATAGAAAAGAGGTGGGAACAACAGGCCTTGCAGTAAAAAAGGTACTGTTGACTGGCACTTATTCCCAGTGCATCTCTATTTTTGGACAGATCAGTTAG 573 0.4136 MPSIRPLPEDVRSSLRSGIFLFDLTRVVEELVFNSLDAVATKVSVFVSVRSCYIKVVDDVDALILLFSFVGLNCVNLISRVAFDNGMYHMYIVQAATSKLLSLADLNDTSGSFGFRGEALASISEVSLLEIWTRTFGRANGYSKVLKGCKCLYLGIDDDRKEVGTTGLAVKKVLLTGTYSQCISIFGQIS 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0021 190 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 2 145 IPR036890 -
Lele50g0021 190 Gene3D - 2 175 IPR036890 -
Lele50g0021 190 ProSitePatterns DNA mismatch repair proteins mutL / hexB / PMS1 signature. 114 120 IPR014762 -
Lele50g0021 190 PANTHER DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL 1 166 IPR038973 GO:0006298|GO:0016887|GO:0032300|GO:0140664
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0021 Lele-ChrLele50 167248 169542 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0021 50 167248 169542 Lele53g1234 53 21008539 21011223 CCT
Lele50g0021 50 167248 169542 Lele54g1206 54 17638956 17641320 CCT
Lele50g0021 50 167248 169542 Lele55g0252 55 1530731 1533410 CCT
Lele50g0021 50 167248 169542 Lele56g0904 56 7692298 7720369 CCT
Lele50g0021 50 167248 169542 Lele51g0020 51 124573 135510 hybridization
Lele50g0021 50 167248 169542 Lele52g0022 52 150438 157066 hybridization