Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0017 ATGCCGCCGAAAGCCGAGTCCGCTTCGAAGTCAGGCCCCGACTTCAAACCCGGCTCCGCCGTCGAGTTCGGCGAGGAGGTCGATGCATACCAAAACGATGGCTGGTGGGAAGGCTCCATAACCCAAGAATTGGGAAACGGGAGGTTCGCGGTGTATTTCAGGCCCTCAAAGGAGCAGATTGAGTTCGGGAAGGAGGACCTTAGGCTGCATCGCGAGTGGGCCAATGGGAATTGGGTCCCTCCATTGGAAGAGCCGTCGGAGGAAAAGAAAAATTTGACAAACGATGTGAAGGCTAGTGAAGAAACAGCGACGGACATGTTTAGCAAGGGGACACATGTTGAGGTTAGCAGTGATGAGGGAGGTTTTGAAGGAGCTTGGTTTGCTGCTACTATTGTTGAACCAAAGGGAAAAGATAAGTTTCTTGTTGAGTATCTGAACCTACGGACTGATGATGATTCAGAGTTTTTGAAAGAGGAAGTTGATTTCTTACATATTCGGCCTTATCCGCCAGAACATGTTTGTGATCAGTTTAAACTTCTTCAAGAAGTTGATGCTTTATACAATGACGGATGGTGGGTTGGACTGATTTCCAAAGTTCTTAGCAACTCAAGGTATGTAGTATACTTCAGGAACACTAATGAAGAATTAGAGTTTCCACACTCCGAGTTAAGGCTACATCAGGAATGGATCAACGGAAAATGGGTCATTGCTTCTAAGGCGTTGAAGCTGTAG 732 0.4699 MPPKAESASKSGPDFKPGSAVEFGEEVDAYQNDGWWEGSITQELGNGRFAVYFRPSKEQIEFGKEDLRLHREWANGNWVPPLEEPSEEKKNLTNDVKASEETATDMFSKGTHVEVSSDEGGFEGAWFAATIVEPKGKDKFLVEYLNLRTDDDSEFLKEEVDFLHIRPYPPEHVCDQFKLLQEVDALYNDGWWVGLISKVLSNSRYVVYFRNTNEELEFPHSELRLHQEWINGKWVIASKALKL 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0017 243 SMART agenet_At_2 19 75 IPR014002 -
Lele50g0017 243 SMART agenet_At_2 175 231 IPR014002 -
Lele50g0017 243 SMART agenet_At_2 105 173 IPR014002 -
Lele50g0017 243 MobiDBLite consensus disorder prediction 1 24 - -
Lele50g0017 243 Pfam Agenet domain 110 170 IPR008395 -
Lele50g0017 243 Pfam Agenet domain 24 82 IPR008395 -
Lele50g0017 243 Gene3D - 97 178 - -
Lele50g0017 243 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 20 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0017 Lele-ChrLele50 146829 149292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0017 117 229 PHD Transcription Factor Family AT5G58610 27.612 2.69e-07 49.3