Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0016 ATGAAACTTGGAATAATGCGCCTTCTGATGGACCCTTCAATCCATTTTCTGTCTCGTTCACCGTCCCACCCAGTGGTCTGCCTCTCTTTGTCCTCTTCCTTCTCGTGCGCATTGCCCAGACGCAGCAGCATCCGAGCTCCCCAGATTGTTTTGCAATCTTGTTCTGCTTCTTCTCCCGGTCCTCCATGGCCAACTGTTGAGGGTCTTGTAGCATATTTCTCGTGTATTCGATATGCTTCTCCTTGCACCTCCTGCTATCGTTCGCTTTCCGGTGTATGTGTGTTAGTACCTTTAAGCTCACCGTTTCTGTCAGCCACAACCACGATGGGGGTTTGGTTTGTGGTGTTGATGATTCTGTTCCATGGATTCTCTCTGACCGTGGCTGGCTCGAATCATTCCACGAGACCTGATTCTGTAAATATTGGGGTTCTCTACTCTTTCAACACCACTGTCGGTCGAATTGTAAAGATTGCAATAGAAGCTGCAATTGAAGATATAAATTCTGATCCATCCATCCTTGGTGAAACTAGGCTCAAAGTCTCAATGCAAGAGGATTCCAAATACAGAGGCTTTCTGAGCATTGCCGAGGCCTTGCGTCTCACTGCGAAACACACGGTAGCTATAATTGGCCCGCAAACCTCCGTCACAGCTCATGTGATATCTCACATTGCAAACGAGCTCCGAGTCCCTCTGCTATCAGTTTCTGCATCGGACCCCACGCTCTCTTCCCTTCAGTTCCCATTCTTTGTGAGAGCTTGTCATAGTGATCTTTATCAGATGGCCGCAATTGCAGAGCTTGTGGACCACTATGGGTGGAGAGAGGTCATTGCAATCTATGTTGACGATGATCACGGAAGAAACGGGATTAGTGTGTTAGGAGATAAGCTCGCTGAGAGACGGTGTAGGATCTCTTTTAAAGCCCCTTTGAGCCCTGAAGCAACTAAGGAGGAGATTACTAATGTGCTTGTTCAGGTGGCCTTGGCAGAATCTAGGATAATAGTTGTACATATCAATGCCGCATGGGGCCCCAAGGTGTTTAGAGTGGCAAAGTATCTCGGAATGATGGGATCTGGGTACGTTTGGATAGCCACTGTTTTTCTCTCTGCTCATATGGATACAAATGGTCCACTCCCTCACGATACAATCGATACGATTCAAGGGGTTCTTACGCTGCGTACCTACACGCCTGATTCAGAGCTCAAACGAAGATTTGTTTCCAGGTGGAAAAACTTGACTCGCGCCAACAACACTGCTCAAAGAGATGCTCGCCTTGGATTGAGTACTTTTGGCCTCTATGCATATGATACTGTTTATGTGCTTGCTCGTGTGCTTGATAGTTTCTTCAAACAAGGGAATCGAATAACATTCTCGTACGATCCTAAGTTGTCTGAGCTGAGCGGCGACAACTTGAACCTTGACTCTGTGAGCATCTTCGATCAAGGAAACGTGTTGAGAGAAAGTATCTACAAGATTGATATGAAAGGGGTAACTGGTACTTTCCAGTATACATCTGACGAAAACCTCGTTAATCCGGCATATGAAATCCTCAATGTGATCGGGACAGGATCCAGGAGGATTGGTTATTGGAGTAACTACACTGGATTATCAGTTGTTGCTCCAGAAGTACTCTATGCTCACCCGCCCAATCGTTCCGCGGCGAGTCAGAAGCTACGGCCAGTGATTTGGCCAGGGGACACAGAGCAGAAGCCTCGGGGTTGGGTTTTTCCAAACAACGGGAGGCTCTTAAAAATCGGAGTGCCAGTGGGATTTAGTTACCGTCAATTCGTGTCACAGGTACAAGGCACTGACATGTTCAAGGGCTTCTGCGTCGATGTATTTCTTTCTGCACTGAACCTGCTGCCTTATGGCGTACCTTATAGGCTTGTTCCATTTGGGGATGGTCGCAGCAATCCTGATAACAACGAGCTTGTTCGTTTGATCACGGCGGGAGTCTATGATGGAGCAGTTGGTGACATTACAATTACGACAGAGCGAACGAGGATGGTAGATTTCACTCAGCCATTCATAGGGTCTGGTCTAGTGATCGTAGCCCCGGTTAGGAAGTCAGACTCCAGTGCTTGGGCCTTTATGAGACCCTTTAGTCCGGAGATGTGGGGCGTCACGGCTATCTTTTTCCTTGCCGTTGGAGCTGCTGTTTGGATATTGGAGCATAGATTGAATGATGAGTTCCGGGGACCTCCCAGAAAACAATTAGTTACAGTTTTGTGGTTCAGTTTTTCAACCATGTTTTTCGCCCACAGGGAAAATACAGTGAGCACTCTCGGTCGATTTGTGCTTCTGATATGGTTATTTGTGGTTCTTATAATAAACTCGAGCTACACGGCAAGCCTGACTTCAATCCTCACGGTGCAGCAGCTTTCTTCTCCCATTAAAGGCATTGAAACTTTAGTCGCTAGCAAGGAGCCTATTGGGTACCTGGAGGGTTCTTTCAGTAGGAACTATCTAATACGAGAAATTGGAATTGATGAATCAAGGCTGGTTCCTCTGAAGACGCTAGAAGAGTCTGCTCAAGCATTAAGAGATGGTCCCAAAAGGGGCGGTGTTGCGGCGTACGTGGATGAGCGTGCTTACATGGAACTCTTCCTTTCGAGCCGATGTGAGTTCACCATAGTAGGTCAAGAGTTTACCAGAAACGGTTGGGGATTTGCATTTCCACGAGACTCGCCTCTGGCGGTAGACATATCGACGGCTATATTGAAATTGGCGGAGAATGGAGATCTGCAGAGGATTCATGACAAATGGCTGCTGAATATCGCGTGCCTGTCACAGAATACAAAGTTTGAAGTGGACAGGCTTCGGCTGAAAAGCTTCTGGGGGCTGTATCTAATATGCGGGGTGGCGTGCATACTTGCACTTATGGTATATGCGATAATGACGATGAGGCAGTACAAGAAGCACCACGTGGCGGAGGTGGAGTCATGTGCGGGATCATCTTCCAGCATTCGCACCTTCCTCACATTTGCTGACCAGAAAGAGTCAGAAGTGAAGAGCCGATCCAAGAGAAGGCAAATGGAGAGGCTCTCAAGTGATGGCGGATCTAACGGTCAATACGCTCTCTCGTCTTCCATCAGAAGCGTACCTTCTGGCGCCGAAGACTGA 3120 0.4772 MKLGIMRLLMDPSIHFLSRSPSHPVVCLSLSSSFSCALPRRSSIRAPQIVLQSCSASSPGPPWPTVEGLVAYFSCIRYASPCTSCYRSLSGVCVLVPLSSPFLSATTTMGVWFVVLMILFHGFSLTVAGSNHSTRPDSVNIGVLYSFNTTVGRIVKIAIEAAIEDINSDPSILGETRLKVSMQEDSKYRGFLSIAEALRLTAKHTVAIIGPQTSVTAHVISHIANELRVPLLSVSASDPTLSSLQFPFFVRACHSDLYQMAAIAELVDHYGWREVIAIYVDDDHGRNGISVLGDKLAERRCRISFKAPLSPEATKEEITNVLVQVALAESRIIVVHINAAWGPKVFRVAKYLGMMGSGYVWIATVFLSAHMDTNGPLPHDTIDTIQGVLTLRTYTPDSELKRRFVSRWKNLTRANNTAQRDARLGLSTFGLYAYDTVYVLARVLDSFFKQGNRITFSYDPKLSELSGDNLNLDSVSIFDQGNVLRESIYKIDMKGVTGTFQYTSDENLVNPAYEILNVIGTGSRRIGYWSNYTGLSVVAPEVLYAHPPNRSAASQKLRPVIWPGDTEQKPRGWVFPNNGRLLKIGVPVGFSYRQFVSQVQGTDMFKGFCVDVFLSALNLLPYGVPYRLVPFGDGRSNPDNNELVRLITAGVYDGAVGDITITTERTRMVDFTQPFIGSGLVIVAPVRKSDSSAWAFMRPFSPEMWGVTAIFFLAVGAAVWILEHRLNDEFRGPPRKQLVTVLWFSFSTMFFAHRENTVSTLGRFVLLIWLFVVLIINSSYTASLTSILTVQQLSSPIKGIETLVASKEPIGYLEGSFSRNYLIREIGIDESRLVPLKTLEESAQALRDGPKRGGVAAYVDERAYMELFLSSRCEFTIVGQEFTRNGWGFAFPRDSPLAVDISTAILKLAENGDLQRIHDKWLLNIACLSQNTKFEVDRLRLKSFWGLYLICGVACILALMVYAIMTMRQYKKHHVAEVESCAGSSSSIRTFLTFADQKESEVKSRSKRRQMERLSSDGGSNGQYALSSSIRSVPSGAED 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0016 1039 FunFam Glutamate receptor 255 414 - -
Lele50g0016 1039 PIRSF IGluLR_plant 108 1032 IPR017103 -
Lele50g0016 1039 SUPERFAMILY Periplasmic binding protein-like I 134 574 IPR028082 -
Lele50g0016 1039 Gene3D - 693 816 - -
Lele50g0016 1039 SMART GluR_14 583 924 IPR001320 GO:0015276|GO:0016020
Lele50g0016 1039 Pfam Receptor family ligand binding region 156 520 IPR001828 -
Lele50g0016 1039 MobiDBLite consensus disorder prediction 1015 1039 - -
Lele50g0016 1039 MobiDBLite consensus disorder prediction 1002 1039 - -
Lele50g0016 1039 Gene3D - 157 510 - -
Lele50g0016 1039 Gene3D - 255 535 - -
Lele50g0016 1039 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 139 996 - -
Lele50g0016 1039 SUPERFAMILY Periplasmic binding protein-like II 560 923 - -
Lele50g0016 1039 Pfam Bacterial extracellular solute-binding proteins, family 3 639 922 IPR001638 -
Lele50g0016 1039 CDD PBP1_GABAb_receptor_plant 140 539 IPR044440 -
Lele50g0016 1039 CDD GluR_Plant 582 922 - -
Lele50g0016 1039 Gene3D - 838 888 - -
Lele50g0016 1039 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 213 241 - -
Lele50g0016 1039 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 344 367 - -
Lele50g0016 1039 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 152 168 - -
Lele50g0016 1039 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 433 445 - -
Lele50g0016 1039 FunFam Glutamate receptor 693 823 - -
Lele50g0016 1039 FunFam Glutamate receptor 819 926 - -
Lele50g0016 1039 FunFam Glutamate receptor 577 693 - -
Lele50g0016 1039 Pfam Ligand-gated ion channel 923 955 IPR001320 GO:0015276|GO:0016020
Lele50g0016 1039 Gene3D - 889 921 - -
Lele50g0016 1039 Gene3D - 579 692 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0016 Lele-ChrLele50 141304 145322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0016 112 1020 Ion Channels AT3G51480 58.753 0.0 1131