Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0015 ATGGCTTTTCTGCAACTACTCAAGGTGGCATCTGCTCCAATTTTGGAGGTCCTGCTTGTCAGTGCAGCCGGAGCTTTCCTCGCAACTCCATATGGCAGGAATATTCTATCACCCGACTTTCGCAAATCCTTGAACCAGCTGGTTTTCAGGGTCTTCACTCCTTCACTTGTATTTGCTAGCTTCGCCAAGACTGTTTCGCTCCAGGATATGATTTCCTGCCAGAAACCCTTTCTTGGTGGGGTTTTTATCTGGACTTATACTTACCAGATAATGAGGAGCAGATCCAGGAAATTTAAGGCTCTTGAGGATGCTGAGGTCCCGAAGGTTCCCAACAATGATAAAGAGGCTCGTCCACAAACTCGCCTCCTCGAGGATGCAGATAAGCAAAATGTTGCGGTACAAATTCCCCCGCCAAACCGAAATATGGAAGACCAACGTTCGTCCAACGTAAGCGAACCATTTTGGCGTAGATTTATTGGGACTATTGGCCAGATTTTAGAAGAACTGAGGGAACCTCCGACAATAGCTACAGTGAGTTCCTTTCTTGCTTCATGTTTGACATTAATTCGCATTGTGGTGCTGATAGATTTTACCTCTTCTGATGATCAGTTTTTCGGTTTCCTCTTTGGTGGGGTTTCTTGGTTGAGGAACCTAATCATCGGCTACAATGCTCCCTTCGCAGTGATCCAAAACTCCATTCAACTACTGGGGTATGAATTAAAATTAAGAATATACCAAATCAATCATAAAAAAGAATCTCTTATTGAAGCACATAGTTGTTTGCAGGGAGGGAACAATTCCTTGCATCACCCTCTTGCTCGGCGGCAATCTCATTCAAGGGCTGCGTTCATCGAGCGTGAGATCATCGAGCGTGATAAGCATAATAGTATCCAAGTATATGGTGATACCTACGATTGGACTGTTTATCGTGAAAGCAGCGGCAAACTTGAAGTTGCTGCCACCAAATCCTCTGTTTCAGTACGTGCTGGTGATGCAATTGTTGCTATTATTAGCATTACTCAACCTCCCATTGGGGATGAGGTTTTCTTTTCTAAAGAATGGAAAATTCATGAGTATCCATGCTATCAGATTCTCAAGCATTCATTTCGAGTGACAGAATATAAGCAAGCGTTTCTTCTTCCTGGCGGTGTTACGTCATGTCAGATGAGATCCGGTAAATGTGAACAATGTAACCATGCCATTCAAATTTTTTCTTTCGTATTTTCATTGGACAATATGCCTAGTACGACACTAATTGTTGCCCCATATCCAAATGGAACAATACATTTGGTGGAGAGTGGATCCATGAGGATGATATGGTCATTTCCAACAGGATCACCAATTTACAATTCATATGAAGCTCCTGTCAACAAGGATAATGATAAAGAAAATGCTTCTGGACCAAGTAATGAGTTCATAGACGTTGGAGATGACTGGAGTTTATAG 1446 0.426 MAFLQLLKVASAPILEVLLVSAAGAFLATPYGRNILSPDFRKSLNQLVFRVFTPSLVFASFAKTVSLQDMISCQKPFLGGVFIWTYTYQIMRSRSRKFKALEDAEVPKVPNNDKEARPQTRLLEDADKQNVAVQIPPPNRNMEDQRSSNVSEPFWRRFIGTIGQILEELREPPTIATVSSFLASCLTLIRIVVLIDFTSSDDQFFGFLFGGVSWLRNLIIGYNAPFAVIQNSIQLLGYELKLRIYQINHKKESLIEAHSCLQGGNNSLHHPLARRQSHSRAAFIEREIIERDKHNSIQVYGDTYDWTVYRESSGKLEVAATKSSVSVRAGDAIVAIISITQPPIGDEVFFSKEWKIHEYPCYQILKHSFRVTEYKQAFLLPGGVTSCQMRSGKCEQCNHAIQIFSFVFSLDNMPSTTLIVAPYPNGTIHLVESGSMRMIWSFPTGSPIYNSYEAPVNKDNDKENASGPSNEFIDVGDDWSL 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0015 481 Pfam Membrane transport protein 11 72 IPR004776 GO:0016020|GO:0055085
Lele50g0015 481 PANTHER - 1 73 IPR045033 GO:0080162
Lele50g0015 481 MobiDBLite consensus disorder prediction 453 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0015 Lele-ChrLele50 135306 139132 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g1234 53 21008539 21011223 Lele50g0015 50 135306 139132 CCT
Lele54g1206 54 17638956 17641320 Lele50g0015 50 135306 139132 CCT
Lele55g0252 55 1530731 1533410 Lele50g0015 50 135306 139132 CCT
Lele56g0904 56 7692298 7720369 Lele50g0015 50 135306 139132 CCT
Lele50g0015 50 135306 139132 Lele50g0015 50 135306 139132 ECH