Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0011 ATGGATTCCGCCGTTGAGGGCACGCCTAGGTATTACGGGCTCTGCGCCATTGGAGGAATGCTCAGTGCTGGCACTACCCATCTCGCCACCACTCCTTTTGACGTCCTAAAAGTAAATATGCAGATGCTGAAAATTTTGAGTGCGGTTTACTTTGTTAGTAGCGCATCTGCTGAAGTATTTTCCAATATAGCTCTATGGCCTTTTGAAGCTGTTAAAGTGAGAGTGCAGACACAGCCCTGTTTTGCAAAGGGGCTCTTTGATGGCTTTCCAAAGTTGTATGCATCAGAATGCACACAAGGTTGTTGGCATGGCATGGTTTCTAAACTTCTGCCCTGGCTGCTTGCTGGTGCGAAAAACGACATTCAGGGAGTTCGAGTTGAATTGTGCTATGCTTTGAAAGAATGCAGAATTTCCGAGATTTTCTGTATTTCTTGGTTGGCACTACCAAGTTGTGTTTTGGTTTTTGTTCTATTTGACAGGCCAACTAGTGGTGAAGTCGTGACTGACTTGGAAAGAAACGAGGTGGTGTCATGGTCACGTAATGCTCTTAATGAACATTTCTGCCCTGAAGCAGAGGAGAGGTTGTTGTTCCATAGTTGCGACTCTCCAACTACAAACGAGTGA 624 0.4535 MDSAVEGTPRYYGLCAIGGMLSAGTTHLATTPFDVLKVNMQMLKILSAVYFVSSASAEVFSNIALWPFEAVKVRVQTQPCFAKGLFDGFPKLYASECTQGCWHGMVSKLLPWLLAGAKNDIQGVRVELCYALKECRISEIFCISWLALPSCVLVFVLFDRPTSGEVVTDLERNEVVSWSRNALNEHFCPEAEERLLFHSCDSPTTNE 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0011 207 SUPERFAMILY Mitochondrial carrier 12 111 IPR023395 -
Lele50g0011 207 Pfam Mitochondrial carrier protein 49 110 IPR018108 -
Lele50g0011 207 Gene3D Mitochondrial carrier domain 15 118 IPR023395 -
Lele50g0011 207 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 47 107 IPR044677 GO:0005315|GO:1990547
Lele50g0011 207 ProSiteProfiles Solute carrier (Solcar) repeat profile. 45 132 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0011 Lele-ChrLele50 111973 114671 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0011 8 42 Chloroplast and Mitochondria Gene Families AT2G17270 71.429 1.39e-10 57.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0011 50 111973 114671 Lele50g0011 50 111973 114671 ECH
Lele50g0011 50 111973 114671 Lele51g0011 51 74819 79038 hybridization
Lele50g0011 50 111973 114671 Lele52g0010 52 87542 89868 hybridization