Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0002 ATGGCAGCAGCGGGTGGGGACGCGTGGAAGGCCCATTTGGCTATGGCGTTTACGCAGATACTCTATGGAGGCTACCACGTTGTCACCAAATTGGCCCTCAACGACGGGATCAACCAGTTAGTCTTCTGCGTCTTCCGCGACCTTATTGCTCTTGTTTTTCTGGCTCCCATCGCTATTTTTCGTGAAAAACAGACGCGACCACCCTTGACTCCGCGCCTCCTTTTGTCGTTCTTCTTTCTTGGCTTAACAGGGATATTTGGCAACCAGATTTTGTTTCTTCTTGGTTTAAGCTATACGAATCCAACTTATGCTGCTGCCACGCAACCTGCCATTCCAGTCTTTACATTTCTTTTGTGTGTGATGATCGGTACAGAAAGAGTAAACTTGCTTAGATATGAAGGTCTAGCAAAGCTTGGAGGAACTTTTGTCTGTGTTTCTGGTGCCGTATTTATGGCTGTGTGTCGTGGTCCTGCACTATTAGATTACAAAGAAACAGATATTATAGCAGAAAGTGAAGTATATACCAAAGGTCAACCTGAGCCATCTGTATGGTTGATTGGTGGTTTGCTGGGCCTTGGGTTAGACCAATTTCACATTGGACTTATGTGCTTGATAGGAAACTGCATGTGCATGGCTGCTTTTATAGCCATCCAGGCTCCTGTGTTAGTAAAGTATCCTGCCAACCTATCTGTAACAGCATATTCTTATTTATTTGGAGCTATTCTGATGATGATAACAGCGTTCTTGACGACTAATGAGTCAACTGATTGGAGATTGACGGAGTCAGAAATACTTGCTGTTATTTATGCTGGAACAATTACTTCTGCCCTTTGTTATGGACTGTTGACATGGTCCAATAAGATCTTGGGGCCAGCTATGGTTGCCCTTTACTATCCAGTTCAACCAGTAGCTTCTGCCCTGTTGTCACAAATTTTCCTTGGAAGTCCAATTTATTTAGGAAGTGTCATAGGGGGATGTTTGATTGTTGCTGGACTGTATATGGTTACTTGGGCATCTTCTAGAGAAAGACAGGCAGCTCTCTTGGTCATTCCTCATGATCCTCGTGTCTCATGGGTCTCTGAACCGCTCATTCATAGAGATGATTTACTCAACAGTAATTCATACTCAAGAGATGTATCACCATAG 1146 0.438 MAAAGGDAWKAHLAMAFTQILYGGYHVVTKLALNDGINQLVFCVFRDLIALVFLAPIAIFREKQTRPPLTPRLLLSFFFLGLTGIFGNQILFLLGLSYTNPTYAAATQPAIPVFTFLLCVMIGTERVNLLRYEGLAKLGGTFVCVSGAVFMAVCRGPALLDYKETDIIAESEVYTKGQPEPSVWLIGGLLGLGLDQFHIGLMCLIGNCMCMAAFIAIQAPVLVKYPANLSVTAYSYLFGAILMMITAFLTTNESTDWRLTESEILAVIYAGTITSALCYGLLTWSNKILGPAMVALYYPVQPVASALLSQIFLGSPIYLGSVIGGCLIVAGLYMVTWASSRERQAALLVIPHDPRVSWVSEPLIHRDDLLNSNSYSRDVSP 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0002 381 Pfam EamA-like transporter family 12 135 IPR000620 GO:0016020
Lele50g0002 381 Pfam EamA-like transporter family 199 336 IPR000620 GO:0016020
Lele50g0002 381 SUPERFAMILY Multidrug resistance efflux transporter EmrE 254 342 - -
Lele50g0002 381 PANTHER WAT1-RELATED PROTEIN 13 343 IPR030184 GO:0016020|GO:0022857
Lele50g0002 381 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0002 Lele-ChrLele50 8201 12837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0002 94 368 Nodulin-like Gene Family AT5G45370 63.082 8.77e-122 352