Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele49g1682 | ATGTCTCAGACATCCAGGATCCCACCTGCGCTTCAATCTATCAAATCAATGCCATATGAGTTAAAGTTAACAGGTAATCCAACCCCTGATCTTCTGGTGAAAAGTCTAAATGTTGAAGTGGGAAGCATCAAGGTAATATCATCACGTAGTCCTGAAAATGGTGCGATAGGAAGGAAGGTTTCTGAGGAACTTCAGGACTGTGATGGCGACATGGATTTCATCAATGAGGACTCGCCATATGGTGAGAAAAATATATCACTTGAAAGTAGGCACTCAAGTGGTGATGAAGAAGTTGATCCTATACCTCTGCCCCTTTCTTCAATCTCAAAGTCTTCGTGGGAACGCAGGTGGAGTGATACAACACCTTATGCTTCAAAAATGAAGCTTCAGTCATGGTTTCAACTTCCAAATGGAAATTGGGAGTTGGGGAAGATTATATCAACTTCTGGAACTGAATCTGTTATTTCACTGCCTGATGGGAAGGTTTTAAAGGTGAAAGGTGAAAGTTTGGTACCGGCAAATCCTGATATTCTTAATGGAGTGGATGATCTGATGCAACTTAGTTATTTAAATGAACCTTCGGTTTTATACAATTTGCAACATAGATACTATCAAAATATTATTTATACAAAAGCTGGGCCAGTTTTGGTTGCTGTAAATCCCTTTAAGAAAGTTCCTTTGTATGGAAACAATTATATTGAAGCATACAAGCGTAAAACAATTGAAAGCCCTCATGTATATGCCATTACAGACACAGCTATTCGGGAAATGATACGAGATGAAGTAAATCAATCCATTATTATAAGTGGTGAAAGTGGAGCTGGAAAAACTGAGACAGCAAAGATAGCAATGCAGTACTTGGCTGCTCTGGGAGGTGGAAGTGGAATAGAGTATGAGATATTGAAGACTAATCCAATACTAGAAGCCTTTGGTAATGCAAAGACATTGAGAAATGACAACTCAAGTCGTTTTGTAAGATCCACACTCGTCATATTAAATCTCTTAGTTGATCTTTTCTTAAATGTATTGAGTAATGGTTCTGTTCATGTTAATTTTGCTGGAAAAGAGAAGTTGAATCTACGAAGTGCAGAAGACTATAAGTATCTCAGGCAGAGCAATTGTTATTTGATATCTGGTGTTAATGATTCAGAGGAATTTGGCATAGTCATGGAAGCTTTGGATGTTGTCCACATTAGCAAAGAAGACCAGGAGAATGTATTTGCAATGCTTGCTGCAGTCCTATGGCTAGGAAACATATCTTTTACCGTAATTGATAATGAAAATCATGTTCAAGCTGTAGAAGACGAGGCTTTGTTCAACGTCACCAAATTGATAGGCTGTGACATTGGAGATCTTAAGTTGACTTTATCAACTCGCAACATGAAAGTTGGTAATGATAATATTGTTCAAAAGTTGAAGCTATCGCAGGCCATTGATGCTAGAGATGCCTTGGCAAAGTCAATATATGCCTGTCTGTTTGATTGGTTGGTAGAGCAAATAAACAAATCGCTTGCTGTTGGCAAAAGGCGTACAGGCAGATCAATCAGTATTCTAGATATATATGGGTTTGAATCATTTGATATGAATAGTTTTGAGCAGTTCTGTATCAATTATGCAAATGAGAGATTGCAGCAACACTTCAACCGTCATTTATTCAAGTTAGAACAGGAGGAATACATACAAGATGGCATTGACTGGGCAAAAGTTGAATTTGAAGATAACCAAGAATGCCTCAATCTTTTTGAAAAGAAACCACTGGGATTACTATCTCTGTTAGATGAAGAGTCCACTTTCCCTAATGGCACAGATCTGACATTTGCTAACAAGCTTAAGCAACATTTGCATTCTAATTCATGTTTCAGAGGACAGCGAGACAATGCTTTTACTGTGTCTCACTATGCTGGGGAGGTCACATACGACACAACTGGATTTCTAGAAAAAAACAGGGATCTCTTGCACTTGGATTCCATTCAACTTCTATCGTCATGCAGGTGTCATCTTCCTCAGATATTTGCATCCTGTATGCTTACTCAGTCTGATAAGCCCGTTGTTGGTCCCTTACACAAGTTTGGCGGAGCTGATTCCCAAAAGCTAAGTGTTGCAACAAAGTTCAAGGGTCAACTGTTCCAATTGATGAAAAGGTTGGAGAGCACAACCCCACATTTTATTCGCTGTATTAAGCCCAATAACACGCAGTCTCCAGGATTATATGAGCAAGGACTTGTGCTACAGCAGCTAAAATGTTGTGGGGTACTAGAAGTGGTTCGAATATCAAGATCTGGCTTCCCTACTAGGATGTCTCACCAAAAGTTTGCCAGAAGATATGGTTTTCTTCTCCTTGAGAATGCTGCATCTCAGGATCCACTTGGTGTTTCAGTTGCAATTCTTCATCAGTTTAATATTTTGCCTGATATGTATCAAGTTGGTTACACAAAATTATTTTTCCGAACATGCCAGATTGGAGTGTTTGAAGATACTAGAAATCGCACCCTCAATGGCATTTTACGTGTCCAAAGTTGCTTCAGGGGTCACCAAGCTCGGGTTTACCTTAAGGAACTTCGCAGAGGAATCACTACTCTTCAGTCTTGTATTTCCCTTTTCACCAATATTTCTTTTATTAGGGGAGAGAACATCAGAAATGAATATGCAGCTTCACTTCAGAGACATCAAGCTGCTGTCCTTATACAAAAGCGGGTGAAAGCAATATTTGTAAGAAGCAGAATGAAGAATACTAATGAAGCTGCAATTGTTATACAATCAATCATTCGTGGCTGGTTAGTCAGAAGATGCTCAGGAGATTTAGGATCATTGAAATCTGAAGGCGTGAAGACAAATGAGTCGGATGAGGTACTGGTCAAGTCTTCTTTCTTAGCTGAATTACAGCGTCGGGTGCTCAAGGCAGAAGCTGCACTGAGAGAGAAAGAAGAGGAAAATGACATCCTCCACCAACGTCTCCAACAGTATGAGAGCCGTTGGTCTGAGTATGAATTGAAGATGAAGTCCATGGAAGAAGTGTGGCAAAAACAAATGAGATCCCTACAGTCCAGCCTCTCCATTGCAAAGAAGAGCCTCGCGATTGATGATTCAGAAAGGAACTCAGATGCATCCGTCAATGCAAGTGATGAAAGAGATTTTAGCTGGGATACAGGAAATAATCATAGACGCCAAGAAAGCAATGGAACAAGATCAATGAGCGCAGGCTTGAGTGTGGTAAGTCGGTTGGCTGAAGAATTTGAGCAGAGGAGTCAAGTATTTGGTGATGATGCGAAGTTCTTGGTGGAGGTAAAATCTGGTCAAGTTGACGCAAGTTTGAACCCAGACCAGGAGCTCAGCAGGTTGAAGCAAATGTTCGAAGCTTGGAAAAAGGATTATGGTGCGAGACTACGTGAAACCAAGGTCATTTTACATAAGCTTGGAACTGAAGAAGGTGCACGTGACAAAGTGAAGAAGAAATGGTGGGGAAGAAAGAACAGTACAAGGATAAATTGA | 3489 | 0.4007 | MSQTSRIPPALQSIKSMPYELKLTGNPTPDLLVKSLNVEVGSIKVISSRSPENGAIGRKVSEELQDCDGDMDFINEDSPYGEKNISLESRHSSGDEEVDPIPLPLSSISKSSWERRWSDTTPYASKMKLQSWFQLPNGNWELGKIISTSGTESVISLPDGKVLKVKGESLVPANPDILNGVDDLMQLSYLNEPSVLYNLQHRYYQNIIYTKAGPVLVAVNPFKKVPLYGNNYIEAYKRKTIESPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFVRSTLVILNLLVDLFLNVLSNGSVHVNFAGKEKLNLRSAEDYKYLRQSNCYLISGVNDSEEFGIVMEALDVVHISKEDQENVFAMLAAVLWLGNISFTVIDNENHVQAVEDEALFNVTKLIGCDIGDLKLTLSTRNMKVGNDNIVQKLKLSQAIDARDALAKSIYACLFDWLVEQINKSLAVGKRRTGRSISILDIYGFESFDMNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVEFEDNQECLNLFEKKPLGLLSLLDEESTFPNGTDLTFANKLKQHLHSNSCFRGQRDNAFTVSHYAGEVTYDTTGFLEKNRDLLHLDSIQLLSSCRCHLPQIFASCMLTQSDKPVVGPLHKFGGADSQKLSVATKFKGQLFQLMKRLESTTPHFIRCIKPNNTQSPGLYEQGLVLQQLKCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLENAASQDPLGVSVAILHQFNILPDMYQVGYTKLFFRTCQIGVFEDTRNRTLNGILRVQSCFRGHQARVYLKELRRGITTLQSCISLFTNISFIRGENIRNEYAASLQRHQAAVLIQKRVKAIFVRSRMKNTNEAAIVIQSIIRGWLVRRCSGDLGSLKSEGVKTNESDEVLVKSSFLAELQRRVLKAEAALREKEEENDILHQRLQQYESRWSEYELKMKSMEEVWQKQMRSLQSSLSIAKKSLAIDDSERNSDASVNASDERDFSWDTGNNHRRQESNGTRSMSAGLSVVSRLAEEFEQRSQVFGDDAKFLVEVKSGQVDASLNPDQELSRLKQMFEAWKKDYGARLRETKVILHKLGTEEGARDKVKKKWWGRKNSTRIN | 1162 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele49g1682 | 1162 | Gene3D | - | 761 | 874 | - | - | |
| Lele49g1682 | 1162 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 399 | 696 | - | - | |
| Lele49g1682 | 1162 | Coils | Coil | 957 | 1005 | - | - | |
| Lele49g1682 | 1162 | Gene3D | - | 887 | 933 | - | - | |
| Lele49g1682 | 1162 | Gene3D | - | 524 | 718 | - | - | |
| Lele49g1682 | 1162 | CDD | MYSc_Myo8 | 193 | 816 | IPR036022 | - | |
| Lele49g1682 | 1162 | Pfam | IQ calmodulin-binding motif | 913 | 929 | IPR000048 | GO:0005515 | |
| Lele49g1682 | 1162 | Pfam | IQ calmodulin-binding motif | 834 | 851 | IPR000048 | GO:0005515 | |
| Lele49g1682 | 1162 | PRINTS | Myosin heavy chain signature | 209 | 228 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele49g1682 | 1162 | PRINTS | Myosin heavy chain signature | 514 | 542 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele49g1682 | 1162 | PRINTS | Myosin heavy chain signature | 305 | 332 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele49g1682 | 1162 | PRINTS | Myosin heavy chain signature | 263 | 288 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele49g1682 | 1162 | PRINTS | Myosin heavy chain signature | 567 | 595 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele49g1682 | 1162 | ProSiteProfiles | IQ motif profile. | 832 | 859 | IPR000048 | GO:0005515 | |
| Lele49g1682 | 1162 | PANTHER | MYOSIN | 172 | 1158 | - | - | |
| Lele49g1682 | 1162 | Gene3D | - | 354 | 397 | - | - | |
| Lele49g1682 | 1162 | Pfam | Myosin head (motor domain) | 181 | 324 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele49g1682 | 1162 | Pfam | Myosin head (motor domain) | 355 | 816 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele49g1682 | 1162 | ProSiteProfiles | Myosin motor domain profile. | 179 | 828 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele49g1682 | 1162 | FunFam | Unconventional myosin-XIX | 526 | 718 | - | - | |
| Lele49g1682 | 1162 | MobiDBLite | consensus disorder prediction | 1030 | 1065 | - | - | |
| Lele49g1682 | 1162 | Gene3D | Kinesin motor domain | 148 | 333 | IPR036961 | - | |
| Lele49g1682 | 1162 | SMART | iq_5 | 887 | 909 | IPR000048 | GO:0005515 | |
| Lele49g1682 | 1162 | SMART | iq_5 | 829 | 851 | IPR000048 | GO:0005515 | |
| Lele49g1682 | 1162 | SMART | iq_5 | 910 | 932 | IPR000048 | GO:0005515 | |
| Lele49g1682 | 1162 | SMART | MYSc_2a | 173 | 829 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele49g1682 | 1162 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 153 | 864 | IPR027417 | - | |
| Lele49g1682 | 1162 | MobiDBLite | consensus disorder prediction | 75 | 101 | - | - | |
| Lele49g1682 | 1162 | Gene3D | Kinesin motor domain | 509 | 757 | IPR036961 | - | |
| Lele49g1682 | 1162 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 126 | 175 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele49g1682 | 1162 | ProSiteProfiles | IQ motif profile. | 911 | 940 | IPR000048 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele49g1682 | Lele-ChrLele49 | 19009079 | 19027920 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele49g1682 | 6 | 1160 | Myosins gene family | AT1G50360 | 71.356 | 0.0 | 1673 |