Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1676 ATGGGCAAATCCAGCAAGAAATCGGCTACCAAAGTTGATTCTGCTCCGGCTGTTGTTCCACCTTCGAAGTCTGCAAAGAAAGGCAAGAGGGAAGCTGAGGAAGAACTTGAGAAGCAAGTGAGTGCAAAGAAGCAGAAGAGAGATGAAGTTACTGAGAAGAAGAATGCCAAGGTGCAGAAAAACAAGAAGGAAAGTAGTTCAGATGATTCCTCTTCCTCAGATTCCGAGGAAGACAAGAAAATTGCCACAAAAGCTGTTCTTCCATCAAAGAAGCAACCTTCTAAGAATGGTGCTCTAAGTGGCCGGTTGAACAAAGGCAAGCCAGCTAGTAGTTCCTCTTCTGAATCCTCTGATGATGATGTGAGAACTAAAGTTGCCCCGCTAAGAAAGAAGGTACCTGTTGCTGCAGCTAAGAAAGTTGAATCAGACTCAGAATCTGAAAGCAGCTCTGATGAGGATGATGTCCCTACTAAATCATCCAAGAAGTTGCCTGTTGCTCCTGCTGCAGGTAAGCCTACACCTGCCAAAAAAATTGAGTCAAGTGATGACACAATCTCTGATGATAGCTCGGATGAAGATGATGATCTAGCGATAAAGATACCTGCTGCATCAAAGAAGTTGCCTGCAACAGCAGTTCCTTCAAAGAAGAAAGTTGAGAGCAGTGAGAGCTCCGAAGATGAATCAAGTGAAAGCTCTGATGAAGATAATGGTATGAAGTCTTCTGTCAAAGCAGGTTCCAAGCCTTCCATTGCTCCAAAGAAGGTTGAATCAAGTGAGAGCTCAGATTCTGATAGCAGTAGCTCTGATGAAGACGACAAAAATAAAAAAGGAGTCAATAATGCTTCCAGTATCAAGCTAGCAGAGGCTTCTGAGAATAAATCCAAGTCAAAGGATAGTTCTGATGAGACTGATTCTGATGACGAGGAGGAATCATCTGACACTGATTCTGAAAATGAGAAGGATAAGATGGATGTTGACGAGGACAGTAATTCTGAAGAAAGTGAGGAGGAGCCTCAAAAGAAAAAGTCTGTAAAAGTTTTAAAGGAAAGCAATGAAAGTTCAGAGAGCTCAGATGATAGCGATGATGAGAATGAGACACCCTCTAAGACTCAGAAAAATCCTAGCACCCCAGCTACTCCAAAAGTACAAAATGGAACGTCAAAGACTCTGTTTGTTGGAAATTTGTCATATAAAGTAGAACAGAGTGATGTGGAGAACTTCTTTAAAGATTGTGGAGAAGTGGTTGGAGTCCGTTTATCCTCAGATGAAAATGGGAGATTTAAAGGCTTTGGGCATGTTGAATTTGCCACGGCAGAAGCAGCACAAAATGTAAGCATTTACTGTGTGACTGATGATCACTTCAGATCTTGTGATTATGGCTTTGAATCTGTTACAGTTATGTACTTGTTTGTTACCATTGACACAATCAATATGCATTGGACCCAAATTCTTTGCGTATTGGACTCTACTGATGTTCTCTGCGCTATAAAATCAGATATTTTGAGGATGACATCTTTATTTGCCCTTGAGTTGAATGGGGAAGAATTGCTTCAGCGTCCCGTCAGACTTGATTTAGCTCGTGAAAAGGGAGCATATACCCCCAATAGCGGCAACTGGAGCAATTCATTCCAGAAAGGAGGACAGGCTCAAGCTCATACATTATTTGTTAAGGGTTTTGATACATCCCAAGGTGAAGATGAGATTAGATCGAACCTGAAAGAGCATTTTAATTGTGGAGAGATTACAAGGATATCAATTCCTAAAGATTATGAGACTGGTGCTGCCAAGGGATTTGCCTACCTGGATTTCAAGGATGCTAATGCCTTGAACAAAGCGCTAGAATTGAATGGAAGTGAGCTTGGAGGTGGTTATTATTTGACGGTTGATGAGGCAAAACCTCGAGGAGATAATCAAGGTGCAAGTGGTGGTAGTCAATTTGGGGGAAGAGGTGGCAGAGGTGGTGGAAGGAGTGGTGGCAGAGGTGGTGGTGGTCAATTTGGGGGAAGAGGTGGCAGAGGTGGTCGTGGAAGAGGGGGCGGTGGCAGGGGCCGTGGCACACCCAACAAACCGAGTCTTGCTGCTGCAGGCACAGAGATGCGTAGTTTCAAGTCCAATGCAGTGGCCAATGGGCTGGCCGGTGCAGGCGGTGGCATTATTGCTCAAATCATAACTTATCCTCTTCAAACGGTAAATACTCGCCAGCAAACCGAGAGAACCCTCAGGGGCAAGAAGTTGGGCCTTCCTCGTTCCCCTAACACGCTTCTTCAGATCCTTCAGGTTATTAAAAGCGAGGGGTGGGGCGGACTATATAGTGGCCTCAAGCCTTCTCTCCTTGGAACTGCTGCTTCTCAGGGCATTTACTACTACTTTTATCAAGTTTTTAAAAATAAGGCAGTGGCCATTGCTGCCTCCAGCAAAGTCAAAGGACATGGAGATGGAACTGTTGGCATGCTTGGCTGGCTTCTTGTGGCTGCTATTGCTGGGTCCTTGAATGTTTTGTTTACAAACCCAATATGGGTTATAGTGACTCGCATGCAGACACATACTCAAGCAGAAAGAAAAATTATGGAGGGAAAGAAAGAAGCCTTACGCAGAGAAGCATCAGAAAGCAGTTCTGCTGATTCAACATTACAAGAAAAATTAGCTGAACTGGAATCTATAAAACCTCAACCATATGGAACTTTACATGCAGCAAAAGAAATGTACAGCGAGGCAGGTATTGTTGGATTTTGGAAGGGTGTCATCCCTTCTTTGATTATGGTGTGCAATCCATCAATCCAGTTTATGATTTATGAGAGCTCGTTGAAGCAGTTAAAGGCAAAACGTGCGGCTAAGAATCAGGGGAATAAAAATGTACCTGCTTTTGAGGTCTTTTTGCTGGGAGCCTTAGCAAAACTTGGAGCTACTGTCTCAACATATCCCCTGTTGGTTGTCAAGTCAAGGCTTCAAGCTAAACAGGAGATCGGTGGAAGTAGCTCGTTAAGATACTCAGGTACTTTTGACGCAATACTTAAAATAATCCGTTATGAGGGATTACCTGGATTTTATAAGGGAATGAGCACAAAGATAGTACAGAGTGTTTTTGCTGCTTCTGTTCTGTTCATGGTCAAGGAGGAACTTGTTAAAGCTTACATGGCGTTGGCAGATAAGAGTAAGAAATTTCTCTTGAAAAGTTAA 3177 0.4328 MGKSSKKSATKVDSAPAVVPPSKSAKKGKREAEEELEKQVSAKKQKRDEVTEKKNAKVQKNKKESSSDDSSSSDSEEDKKIATKAVLPSKKQPSKNGALSGRLNKGKPASSSSSESSDDDVRTKVAPLRKKVPVAAAKKVESDSESESSSDEDDVPTKSSKKLPVAPAAGKPTPAKKIESSDDTISDDSSDEDDDLAIKIPAASKKLPATAVPSKKKVESSESSEDESSESSDEDNGMKSSVKAGSKPSIAPKKVESSESSDSDSSSSDEDDKNKKGVNNASSIKLAEASENKSKSKDSSDETDSDDEEESSDTDSENEKDKMDVDEDSNSEESEEEPQKKKSVKVLKESNESSESSDDSDDENETPSKTQKNPSTPATPKVQNGTSKTLFVGNLSYKVEQSDVENFFKDCGEVVGVRLSSDENGRFKGFGHVEFATAEAAQNVSIYCVTDDHFRSCDYGFESVTVMYLFVTIDTINMHWTQILCVLDSTDVLCAIKSDILRMTSLFALELNGEELLQRPVRLDLAREKGAYTPNSGNWSNSFQKGGQAQAHTLFVKGFDTSQGEDEIRSNLKEHFNCGEITRISIPKDYETGAAKGFAYLDFKDANALNKALELNGSELGGGYYLTVDEAKPRGDNQGASGGSQFGGRGGRGGGRSGGRGGGGQFGGRGGRGGRGRGGGGRGRGTPNKPSLAAAGTEMRSFKSNAVANGLAGAGGGIIAQIITYPLQTVNTRQQTERTLRGKKLGLPRSPNTLLQILQVIKSEGWGGLYSGLKPSLLGTAASQGIYYYFYQVFKNKAVAIAASSKVKGHGDGTVGMLGWLLVAAIAGSLNVLFTNPIWVIVTRMQTHTQAERKIMEGKKEALRREASESSSADSTLQEKLAELESIKPQPYGTLHAAKEMYSEAGIVGFWKGVIPSLIMVCNPSIQFMIYESSLKQLKAKRAAKNQGNKNVPAFEVFLLGALAKLGATVSTYPLLVVKSRLQAKQEIGGSSSLRYSGTFDAILKIIRYEGLPGFYKGMSTKIVQSVFAASVLFMVKEELVKAYMALADKSKKFLLKS 1058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1676 1058 MobiDBLite consensus disorder prediction 369 387 - -
Lele49g1676 1058 SUPERFAMILY Mitochondrial carrier 705 1039 IPR023395 -
Lele49g1676 1058 FunFam Nucleolin 2 537 688 - -
Lele49g1676 1058 MobiDBLite consensus disorder prediction 134 159 - -
Lele49g1676 1058 SUPERFAMILY RNA-binding domain, RBD 366 444 IPR035979 GO:0003676
Lele49g1676 1058 ProSiteProfiles Solute carrier (Solcar) repeat profile. 704 797 IPR018108 -
Lele49g1676 1058 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 552 633 IPR000504 GO:0003723
Lele49g1676 1058 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 388 528 IPR000504 GO:0003723
Lele49g1676 1058 MobiDBLite consensus disorder prediction 334 354 - -
Lele49g1676 1058 Gene3D Mitochondrial carrier domain 871 1054 IPR023395 -
Lele49g1676 1058 SUPERFAMILY RNA-binding domain, RBD 547 664 IPR035979 GO:0003676
Lele49g1676 1058 MobiDBLite consensus disorder prediction 632 693 - -
Lele49g1676 1058 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 554 622 IPR000504 GO:0003723
Lele49g1676 1058 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 390 443 IPR000504 GO:0003723
Lele49g1676 1058 ProSiteProfiles Solute carrier (Solcar) repeat profile. 952 1043 IPR018108 -
Lele49g1676 1058 SMART rrm1_1 389 460 IPR000504 GO:0003723
Lele49g1676 1058 SMART rrm1_1 553 629 IPR000504 GO:0003723
Lele49g1676 1058 MobiDBLite consensus disorder prediction 1 387 - -
Lele49g1676 1058 MobiDBLite consensus disorder prediction 89 116 - -
Lele49g1676 1058 ProSiteProfiles Solute carrier (Solcar) repeat profile. 815 937 IPR018108 -
Lele49g1676 1058 Coils Coil 26 53 - -
Lele49g1676 1058 Gene3D - 324 446 IPR012677 -
Lele49g1676 1058 Gene3D - 535 606 IPR012677 -
Lele49g1676 1058 Pfam Mitochondrial carrier protein 705 796 IPR018108 -
Lele49g1676 1058 Pfam Mitochondrial carrier protein 816 938 IPR018108 -
Lele49g1676 1058 Pfam Mitochondrial carrier protein 951 1044 IPR018108 -
Lele49g1676 1058 Gene3D - 508 622 IPR012677 -
Lele49g1676 1058 Gene3D Mitochondrial carrier domain 689 867 IPR023395 -
Lele49g1676 1058 MobiDBLite consensus disorder prediction 24 85 - -
Lele49g1676 1058 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 705 1048 IPR044712 GO:0006862|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1676 Lele-ChrLele49 18921848 18932964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1676 726 1044 Chloroplast and Mitochondria Gene Families AT1G25380 27.052 1.89e-28 116