Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1671 ATGGTTTTGAAGCAGGAAGACAGAACCAGTTACGGATTAGTTTTCCTTGTCATATCGGTAATGCTTCATATTGTTGACATTGATTACTCCATTGGTCCATATACTTCGATGTCTGTTTTCAAAATTCGTACTAGTCCCAATACTTTAAAAATGTATGATTGGGTTCCTGCCACGAATCGTAAATTTGTAAACAGATTAATGAGAGTGCACTCGACATTTACCTGCAGTTGTGTTGCGAAAGACCTAAATGATGTCAATATGTTAAAGGGCCTTAGGTATACTGGGGATGCTCGCATGCTGCTGTTGCTTTCACTAAAGTTTGGCATTATCCCAATTGTTGTGCCTGTTGGTGTTCGAGATTTTGACATTGATGGTGAACTATGGGTAAAATTGCGACTAATCCCAATGGAGCCTTGGGTTGGAGCTGTTTCATGGGCTTTTGTTTCACTTCCAAAGATCAAGTTTGAATTGTCACCATTCCGTTTATTTAATTTAATGGCAATTCCAGTTCTCTCAATGTTTTTGACAAAACTCCTCACGGAAGATTTACCTCGGTTATTTGTACGTCCAAAGAAAATCGTTTTGGATTTCCAGAAGGGAAAAGCTGTTGGTCCTGTTGCTGGTGATTTAAAATCGGGAGAATTGCAAGATGGAAACAAGGATTTTGTTGGTGAACTATCCGTCACTCTTATTGATGCTAGAAAGCTTTCTTACTTTTTCTATGGGAAGACAGATCCGTATGTTATCCTTACCCTTGGAGATCAAACTATTCGCAGCAAAAAGAATAGTCAAACTACTGTGTTTGGTCCCCCTGGCATGCCAATTTGGAACCAGGATTTTCATATGCTGGTCACTAACCCTAAAAAGCAGAAGTTACACATCCAAGTAAAGGATTCGTTGGGATTTATGGATTTGACTACAGGAACTGGGGAGATTGATCTGGGATCTCTCCAAGACACTGTACCAACAGACCGGGTTGTGGTTTTGCAAGTTGGTTGGGGGATTTTGGGAAAGGGCTCTTCTGGGGAGATATTGCTACGACTAACTTATAAATCATATGTGGAGGATGAGGAAGATGACAAGACCGACTCCATCGATACAGATGCTTCAGATGATGAGTTGTCTGATTCAGAGGAATCAAGTGGTACTAATGAGAGGGGTGAAAGAGATGCTATGAGTGAAAGAGAGTCATTTATGGATGTTTTGGTAGCATTAATTGTTAGTGAAGAATTCCAAGGTATAGTGGCATCTGAAACAGGGCATGCCAAAACTTCAGATGACAGCTTAAGTACAGGGTCTAATGTTCCAAGGTCCAATCTTAATGTGGAACCAAACCCTTCAAATTCTGATAGTTCTGAAGGGTCTACAGGGTCAACCTTATTCTGGTTTGCTGTGATTACTAGCATATCAATCCTAATTGCTCTCAATATTGGAGGTTCAAGTATTTTCAATCCTTAA 1458 0.4012 MVLKQEDRTSYGLVFLVISVMLHIVDIDYSIGPYTSMSVFKIRTSPNTLKMYDWVPATNRKFVNRLMRVHSTFTCSCVAKDLNDVNMLKGLRYTGDARMLLLLSLKFGIIPIVVPVGVRDFDIDGELWVKLRLIPMEPWVGAVSWAFVSLPKIKFELSPFRLFNLMAIPVLSMFLTKLLTEDLPRLFVRPKKIVLDFQKGKAVGPVAGDLKSGELQDGNKDFVGELSVTLIDARKLSYFFYGKTDPYVILTLGDQTIRSKKNSQTTVFGPPGMPIWNQDFHMLVTNPKKQKLHIQVKDSLGFMDLTTGTGEIDLGSLQDTVPTDRVVVLQVGWGILGKGSSGEILLRLTYKSYVEDEEDDKTDSIDTDASDDELSDSEESSGTNERGERDAMSERESFMDVLVALIVSEEFQGIVASETGHAKTSDDSLSTGSNVPRSNLNVEPNPSNSDSSEGSTGSTLFWFAVITSISILIALNIGGSSIFNP 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1671 485 MobiDBLite consensus disorder prediction 418 454 - -
Lele49g1671 485 Pfam C2 domain 224 320 IPR000008 -
Lele49g1671 485 ProSiteProfiles C2 domain profile. 211 327 IPR000008 -
Lele49g1671 485 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 224 352 IPR035892 -
Lele49g1671 485 MobiDBLite consensus disorder prediction 356 393 - -
Lele49g1671 485 Gene3D C2 domain 222 366 IPR035892 -
Lele49g1671 485 SMART C2_3c 225 326 IPR000008 -
Lele49g1671 485 MobiDBLite consensus disorder prediction 359 378 - -
Lele49g1671 485 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 82 485 - -
Lele49g1671 485 MobiDBLite consensus disorder prediction 379 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1671 Lele-ChrLele49 18879681 18887423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1671 215 317 C2H2 Transcription Factor Family AT4G05330 33.654 4.81e-06 46.6