Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1662 ATGTCTCGGCAGCCTAAAGCCCCCGCATATCACAAATCGAAGACCCTCGACAATAAATATCTGCTGGGAGATGAGATTGGGAAAGGAGCATATGGTCGGGTTTACAAAGGTTTGGACTTGGAGAATGGAGACTTTGTTGCAATTAAACAAGTTTCCTTGGAAAATATTCCTCAGGAAGATCTCAACATCATCATGCAAGAGATTGATTTGTTGAAGTGTATAGTTGTAATTACATCATCTTCATTCGTAAGGTACTTAAAAGAAACATTGGATTTGCAACTGAAAAGGTATGTAGAGAATGGCTCACTTGCGAATATTATCAAGCCAAACAAATTTGGACCCTTTCCAGAATCATTGGTTGCTGTTTATATTTCCCAGGTATTGGAAGGCTTGGTTTATCTACATGAACAGGGGGTAATCCATCGAGATATTAAAGGTGCAAATATATTGACAACTAAAGAGGGTCTCGTTAAACTTGCTGATTTTGGTGTGGCAACTAAATTGACTGAGGCTGATGTCAATACTCATTCCGTTGTTGGAACACCGTATTGGATGGCCCCAGAGGTTATAGAAATGTCTGGTGTTTGTGCTGCCTCTGACATTTGGAGTGTTGGCTGTACGGTTATTGAACTTCTTACATGCGTACCCCCTTATTTTGATCTGCAGCCTATGCCAGCTCTCTTTCGTATTGTTCAGGATGAACATCCTCCACTTCCAGATAGCTTGTCTCCTGACATCACTGATTTTTTATGCCAATGCTTTAAGAAGGTAAAGTGGATAATTTTTCATGAGTTTGAACATTCTCCCCTTAATGTATGTGGTGTTGCTAGTTGCTGTTAG 840 0.4024 MSRQPKAPAYHKSKTLDNKYLLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIPQEDLNIIMQEIDLLKCIVVITSSSFVRYLKETLDLQLKRYVENGSLANIIKPNKFGPFPESLVAVYISQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYFDLQPMPALFRIVQDEHPPLPDSLSPDITDFLCQCFKKVKWIIFHEFEHSPLNVCGVASCC 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1662 279 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 15 256 - -
Lele49g1662 279 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Lele49g1662 279 Gene3D Transferase(Phosphotransferase) domain 1 17 261 - -
Lele49g1662 279 SUPERFAMILY Protein kinase-like (PK-like) 17 256 IPR011009 -
Lele49g1662 279 CDD STKc_Cdc7_like 19 256 - -
Lele49g1662 279 Pfam Protein kinase domain 23 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g1662 279 SMART serkin_6 20 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g1662 279 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Lele49g1662 279 FunFam MAP3K epsilon protein kinase 1 17 260 - -
Lele49g1662 279 PIRSF ILK 2 259 - -
Lele49g1662 279 ProSiteProfiles Protein kinase domain profile. 20 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1662 Lele-ChrLele49 18785016 18794473 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1662 1 256 MAP Kinase Kinase Kinase AT3G13530 84.674 4.74e-149 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE-Pl Lele49g1662 Pkinase 1.2e-53 CL0016