Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1660 ATGGGGAGTTGCGGAAGGGAAGGATCGGTGAGGCAGTATATACGATCGAAAGTCCCTCGTCTACGATGGACTCCTGAACTTCATCGCTGCTTTGTTCACGCCATTGACACCCTCGGAGGTCACCACAAGGCGACGCCTAAGCTTGTACTTCAGATGATGGATGTCAAAGGTCTCACTATTTCGCACGTGAAGAGCCATCTACAGATGTACAGAAGCATGAGAAGCAATTTGGGTAGACAAGATGGGAGTTCGAGCCACCATAGAAAACAATCTTTTGAGGAACATGATGATGGGTGTGTTGATGAAGTTAATGATGCGGATGCTGGTAGAGGTAGTATTATTCAACATTGCTCAAAATCCAGGAGGAAAGAATCAGATTCCCTTATGAGCTACAGTGATTTCTCCCCTAAAAGAGCGAGAATGGAGACGAGGAGTTGCATAGCAGGAGCAGAGAGGCAAAGAACATGTGAGGCAGGAACAGTGACGAATCCGTACAGCTTTTATGATTATGTGCAGGTAATGGGTGAGCGCAAGGGAATAAAGGAGGCTTCTTCTTCATCATCTTCTGCTGCTGCAACAATATCAATATGGCAGAATCATCCCTTCTCTCTTCTGCCACATTTTCCTAACCTCACTTCTTTCAACCAACAATCTGATTTTCTTCAGGGTCCCGAATTAGTTAGCAGAAGAAATGTGGGTTCAGTGGCGAAGAATGAAGGAGGAAGAGGGTGTGAGCTGTCACTATCTCTGTCACTGCCAAATCAGTCCTCAAAGAGGAGCGATACGATTACAAACAACGCTTCTTCGAGCAGCGAAATGAGTGAAGGCATCTCATTGATCTCGTGTTCTGCCTCCGGCAAAGATACTATTAACTTAGACTTGTCTATAGCCCTTTACGGGAAAGCATACCAGAAGCGGCCGTCTGGTCGAAATGGCTCAACTATGGCGATCCTCAATAAGGCAATGACCATGGCGGGGGTCGCACAGGTCGAACTGTTGTTGCGGGATCAGCCTCCACCAGCTAGCCCTAAGAGCCGCAATCAGCTCAAACGTCAGGCTAAACGTGCTGTGCTTTGGGGCATGGAGCTGGCTTCTTTCTCTGCTCCTCAAATCAAGCGAACACTCAGAGTGGTTTCTGTGGACCGAGAAGTGTTTGAAGCTCTGATGCTGGTTAAGGTGATTTTCCATTTTATAAATGAAGATGAGTTATGCGGATTAAGACCAGATGTCCGCGAAAGACGGAGGAGGCAGTTCAACTATATTGGAAAATTGCTGCGGGAAGTGCAACCTGAATTGACGGATAAATTAATAGAAGCAACAAAAGAAGGCATTCACAGCGAGCTACAAAAATTTTGTGGCTCAGATTCTGAGGTTCTTGAAGGTGATGATGACTTTACAGAATCTGAGTCTGAGGGGGATGGTTAG 1425 0.4639 MGSCGREGSVRQYIRSKVPRLRWTPELHRCFVHAIDTLGGHHKATPKLVLQMMDVKGLTISHVKSHLQMYRSMRSNLGRQDGSSSHHRKQSFEEHDDGCVDEVNDADAGRGSIIQHCSKSRRKESDSLMSYSDFSPKRARMETRSCIAGAERQRTCEAGTVTNPYSFYDYVQVMGERKGIKEASSSSSSAAATISIWQNHPFSLLPHFPNLTSFNQQSDFLQGPELVSRRNVGSVAKNEGGRGCELSLSLSLPNQSSKRSDTITNNASSSSEMSEGISLISCSASGKDTINLDLSIALYGKAYQKRPSGRNGSTMAILNKAMTMAGVAQVELLLRDQPPPASPKSRNQLKRQAKRAVLWGMELASFSAPQIKRTLRVVSVDREVFEALMLVKVIFHFINEDELCGLRPDVRERRRRQFNYIGKLLREVQPELTDKLIEATKEGIHSELQKFCGSDSEVLEGDDDFTESESEGDG 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1660 474 SUPERFAMILY Homeodomain-like 17 74 IPR009057 -
Lele49g1660 474 Pfam Myb-like DNA-binding domain 21 71 IPR001005 -
Lele49g1660 474 Gene3D - 357 444 IPR023153 -
Lele49g1660 474 Gene3D - 18 75 - -
Lele49g1660 474 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 19 72 IPR006447 GO:0003677
Lele49g1660 474 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
Lele49g1660 474 PANTHER OSJNBB0026I12.6 PROTEIN 342 471 - -
Lele49g1660 474 SUPERFAMILY PSPTO4464-like 355 448 IPR023153 -
Lele49g1660 474 MobiDBLite consensus disorder prediction 111 130 - -
Lele49g1660 474 MobiDBLite consensus disorder prediction 248 270 - -
Lele49g1660 474 Pfam Protein of unknown function (DUF615) 343 448 IPR006839 -
Lele49g1660 474 MobiDBLite consensus disorder prediction 81 97 - -
Lele49g1660 474 MobiDBLite consensus disorder prediction 76 105 - -
Lele49g1660 474 FunFam Myb family transcription factor 17 75 - -
Lele49g1660 474 MobiDBLite consensus disorder prediction 237 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1660 Lele-ChrLele49 18763862 18768729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1660 1 77 G2-like Transcription Factor Family AT1G14600 73.171 3.36e-34 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele49g1660 DUF615 6.3e-17 No_clan