Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1649 ATGACTTCAGACGAAGATTCCTTGTCAAATGATTTTGGACTTAGACCGAGCCTTGGAACTAAATCTGGAGTTATCGACGTCATTGGCATTGGCAGCAGGAAGGACGCAGTTCTAGATTTCTGCTTAAAGTCTCCTTTTCAGTTATCGTCGCTGCGATTTTGGTGTTATGATAAGCTATGGAATATTCTTATGAAGGAATCTCAAGAGGTTCAATTACTACTAAGGTCTTATGAAGAAGATTATCTTCCAAGAATTGTCAAAGCTCCATTATTTTTGAAGTCATGCTCAACAACTATTATTCTTGTTTCTAGTGCAGGATATGGATCAGATCACTCTGTTGCAGTTGATGTTTTCAAAACAATAAAGTCATCAAATGGATCAACTGTCAAAGATTTGGTAGAGAAACTAAAGGAGAACACCCGATCTACTTATTGGCGAGTTATGTTTCCTATGGGTTATGAGAGTGGATACTTTTCTAATGGCCGGACCTTGGCAGACATTGATATTGATTCACTACTTAAAAAGGACTTGGTGACTCTATATGAAGCTATGAAAACTGCAAATGATGCAGTTTTGTTGGCCATTAATGCCATATCTTCTCAAATCAATGGTCTGCATGGCGGTGGCCCGAAAGAAGTCGGTAATTTGGAAATTAATAAAATATTTGAAAGCTATAAGGAAGCTAGAATTGGATTTGGAGCAGCATATAACATGACAACATCAATTCTACAGTCTTTACTTGATTGTCCTTTTCTTGGTGTTAGTTTGAAGGAATCAAATAGCATGGTTATATGCAATCTCACAAGTTCAGTTCCTATTGATGAGAATGATATAGCCTCATTTCTGCATACTTTCCGTCAAACAACTGGATACACGAAGGAAATAATAATATCTACAGACCATGAGCCTAATATTGAGCCAAACCTCCTAATCACCACTGTTTTTGCACTGGGCATAAATATGCTACAATCTTCCCAGAGTGGTGTTGCACAGGAGTGGGCCAAACAAAGGGCAGCTGACGCTACTACAACAGTTGATAATGTTAGCATCTTCAACCTTCCTGTTGGGGTAAGATCTTCCGAACAGTTAAAAGGCCGTTCAGAAGTCTCCATGGCACAAGAGGCAGCAACTGAAAATGATGTCAAAGTACCTAATAAAAGCATGCCTTGGAGTGCATTGACTAATGCAGGTCGGGAAGCAGTGACGGATTTTACATCTACGTTTTTAAATGGAAAGCATGCACACAAATCAAACAAGCAAGGGGTTCTTTCTGCTCGAGCGGCATCCATGCTGGAATCAGAACGTGATTCATCAAAAAAATGGATCCCAATTGTGGAAATGCAATATAGAGGAGGTCAATACAAGGGACGATGTCAAGGAGGTCTACCCGAAGGTAAGGGGCGACTTGTCCTCGGAGATGGAAGTATATACGATGGTACATGGCGCTATGGTAAGAGATCAGGTCCTGGCACATTGTATTTCATCCATGGCGATGTGTTCCAAGGATCATGGAGAGACGATCTTATGCATGGTAAAGGCTGGTGTTTTTTTTTCACACAGGGGATAGGTGGTTTGCAAACTTTTGGAAGGGAAAGGCAAATGGTGAAGGCCGTTTCTACACAGAGAATGGGGATGCCTTCTTTGGCAATTTTAAAGATGGATAGCGACACGGGCAATTTGTATGTATGGATGCTAAAGGAACAAGGTACATTGAGATTTGGGAATATGGTTTTATTGTAG 1740 0.4046 MTSDEDSLSNDFGLRPSLGTKSGVIDVIGIGSRKDAVLDFCLKSPFQLSSLRFWCYDKLWNILMKESQEVQLLLRSYEEDYLPRIVKAPLFLKSCSTTIILVSSAGYGSDHSVAVDVFKTIKSSNGSTVKDLVEKLKENTRSTYWRVMFPMGYESGYFSNGRTLADIDIDSLLKKDLVTLYEAMKTANDAVLLAINAISSQINGLHGGGPKEVGNLEINKIFESYKEARIGFGAAYNMTTSILQSLLDCPFLGVSLKESNSMVICNLTSSVPIDENDIASFLHTFRQTTGYTKEIIISTDHEPNIEPNLLITTVFALGINMLQSSQSGVAQEWAKQRAADATTTVDNVSIFNLPVGVRSSEQLKGRSEVSMAQEAATENDVKVPNKSMPWSALTNAGREAVTDFTSTFLNGKHAHKSNKQGVLSARAASMLESERDSSKKWIPIVEMQYRGGQYKGRCQGGLPEGKGRLVLGDGSIYDGTWRYGKRSGPGTLYFIHGDVFQGSWRDDLMHGKGWCFFFTQGIGGLQTFGRERQMVKAVSTQRMGMPSLAILKMDSDTGNLYVWMLKEQGTLRFGNMVLL 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1649 579 PANTHER RADIAL SPOKE HEAD 1 HOMOLOG 167 517 - -
Lele49g1649 579 SMART morn 475 496 IPR003409 -
Lele49g1649 579 SMART morn 498 519 IPR003409 -
Lele49g1649 579 SMART morn 452 473 IPR003409 -
Lele49g1649 579 Pfam MORN repeat 459 475 IPR003409 -
Lele49g1649 579 Pfam MORN repeat 477 494 IPR003409 -
Lele49g1649 579 Pfam MORN repeat 500 517 IPR003409 -
Lele49g1649 579 Gene3D Tubulin/FtsZ, GTPase domain 160 319 IPR036525 -
Lele49g1649 579 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 451 518 - -
Lele49g1649 579 Gene3D - 453 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1649 Lele-ChrLele49 18651835 18659605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1649 329 521 PP2C-type Phosphatase Gene Family AT1G75010 55.440 1.04e-56 201