Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1647 ATGGAGGACCCATGGCAGACTAGTTTTCCTCGACTGCTCGATATGGATGATGATGAAGATTTCCATGATCAATATAATCAAATGATGATGTCTTTGGACGAGGAAGACGAAGAGTTTCTGAGAGACATTATGCAGCAAACAGGTCGTCGTCATCATCTGTCTTCTCAAACTGAAAATAATTTGAGAGAAACTCAAAATAGCGTCAGTTCCGGCGGCAACATTAATGGTTCGAAGGATCAAAACCGCATGATGTCTCCAAGGGCATACATTCTGTCCTTCGACAACTCTGACGTAAAACCATTAATCTCAACAAAAGAAGGAGAATCTAATGACCGTTGTTCCTCAAAAAGAATCAGAACAGGCCATAACGTTGATCCCAGAAAGACAAAAAGAAAGCGTTCAGGGACTTTTGATCATATAATGGCAGAGAGGAGAAGGAGACAACGAATTACTGACAAGTTCATTGCACTTTCTGCAACTATTCCTGGCTTGAAGAAGTTGGACAAAGCAACGATACTGGATGAAGCTATCAAATACATGAAACAACTTGAGGAACGTGTAAGAGAACTAGAGAGAGAGTCGTCGGTGATATCCATAAAGAGAATTGAGGTTTGTGACGATAATTATGATTTGTGTGAAGTGAATGAAGTATTGCCTAAGATTGAAGTAAGAGTTTCAGAGAACCAAATGCTTCTGGGAATCCATTGCCAGAAACAAAAGGGCGTTGAGTTCAAAATATTGAGTTTGCTTGAGAATTTTCATCTGTGTGTCACCAGTAGTAGCATCTTACCATTTGGAGATTCCGCTCTTGGAATTACCATTATTGCTCGGGTGCTTGACGAATACAACGAGATGAGAGTGAATGATGTGGTGAAAAGACTGCGACAAATTCTATCAAAATTGCATGAGGATGATTCATACTAG 924 0.4004 MEDPWQTSFPRLLDMDDDEDFHDQYNQMMMSLDEEDEEFLRDIMQQTGRRHHLSSQTENNLRETQNSVSSGGNINGSKDQNRMMSPRAYILSFDNSDVKPLISTKEGESNDRCSSKRIRTGHNVDPRKTKRKRSGTFDHIMAERRRRQRITDKFIALSATIPGLKKLDKATILDEAIKYMKQLEERVRELERESSVISIKRIEVCDDNYDLCEVNEVLPKIEVRVSENQMLLGIHCQKQKGVEFKILSLLENFHLCVTSSSILPFGDSALGITIIARVLDEYNEMRVNDVVKRLRQILSKLHEDDSY 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1647 307 MobiDBLite consensus disorder prediction 47 81 - -
Lele49g1647 307 Pfam Helix-loop-helix DNA-binding domain 139 184 IPR011598 GO:0046983
Lele49g1647 307 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 134 183 IPR011598 GO:0046983
Lele49g1647 307 SMART finulus 140 189 IPR011598 GO:0046983
Lele49g1647 307 Gene3D - 122 198 IPR036638 GO:0046983
Lele49g1647 307 MobiDBLite consensus disorder prediction 104 122 - -
Lele49g1647 307 MobiDBLite consensus disorder prediction 49 81 - -
Lele49g1647 307 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 138 198 IPR036638 GO:0046983
Lele49g1647 307 MobiDBLite consensus disorder prediction 101 133 - -
Lele49g1647 307 PANTHER BHLH TRANSCRIPTION FACTOR 29 299 - -
Lele49g1647 307 Coils Coil 173 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1647 Lele-ChrLele49 18611484 18612949 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1647 131 301 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 44.865 2.61e-38 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele49g1647 HLH 8.5e-12 No_clan