Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1637 ATGCAAGTTATAAAAGCAATGCCGGACGAAATTTCTATTTCTCATTCTTCTACGTCTTCGGACACGGAGTCCGACCCATCGGATGCAGTGATATTCGCTGGACTCTGTCTGGCTTTGGGAGTTGCTTGTAGGCATGTTTTTCGCGGGACCAAAGTTCCTTATACAGTGGCTCTGCTCATCGTTGGCATTGGCCTTGGATCATTAGAATATGGTACTCATCATCAACTGGGAAAGATTGGCAATGGAATTCGTCTTTGGGCAAATATTGATCCAGGGCTTCTATTAGCTGTTTTCCTTCCTCCACTCCTCTTTGAGGGCTCATTCTCAATGGAATTTCACCAAATTAAGTGGTGTATTGCACAAATGATATTACTAGCTGGTCCAGGTGTTTTGCTCTCAACCTTCTGTCTTGGATCTGTTTTGAAGCTTACTTTTCCATATAACTGGAGTTGGAAAATATCACTATTGCTGGGCGGACTTCTGAGTGCAACTGATCCTGTAGCAGTTGTGGCTTTGCTGAAAGAGCTTGGTGCCTGCAAGAAACTGACTACAATAATTGAAGGGGAATCCATGATGAATGATGGAGTGGCAATGGTTGTTTATACACTATTATTTCGGATGGTCCTTGGAGAGAGCTTCAACTGGGTGGCCATAATCAAATTTCTATCAAAAGCTTCTCTTGGAGCTGTAGGAATTGGCCTTGCTTTTGGGATGGCATCAGTTCCGTGGTTTGGATATATTTTTAATGATATAGTGATTGAAATCACTCTAACACTTGCTGTTAGCTATGTTGCTTACTTCACTGCTCAAGAGGGTGTTGATGTTTCTGGCATTTTGACAGTGACGACTCTGGGAATGTTTTACTCTGCAGTTGAGAGGATAGCTTTTAAGAGTGATGGACCAGGAAGCTTGCATCACTTTTGGGAAATGGTTGCTTATATTTCGAATACATTAATTTTCATATTGAGTGGAGTTATTATTGCTGAAGGAGTCCTTAATGGTTCCAATGTTACTGCTGATGGAAAATCATGGGTCAACCTCTTTGTTCTCTATGCCTATGTTCAAGCTTCTAGATGCATAGCAGTTGGAGCACTTTATCCCTTACTAAGTTATTTTGGACATGGTTTGGATTGGAAAGAGGCTGTATTTCTTGTTTGGTCAGGATTGCGAGGGCCAGTTTCCTTGTCACTAGCATTGTCAGTTAAGGCAAGTATACATGGTCTCAGGACGAAGTATCTGTGGGAGAGTAGATGTGATGGGGAATCTGAAGCAATTATTGGTGGAACAAATCTGAAAGGTCAGCAGTGCCTATTCAGAGGAGATCTGGACGTTTGGCTCAAATGGGATTCAAAAACAAGGAGGATGAAGTCCAATAATGAAGAAGGCTCATGGACCAAGGATGTACTTTATATGGAAGCTTATGGATTATACCTGATATTGTAG 1443 0.4179 MQVIKAMPDEISISHSSTSSDTESDPSDAVIFAGLCLALGVACRHVFRGTKVPYTVALLIVGIGLGSLEYGTHHQLGKIGNGIRLWANIDPGLLLAVFLPPLLFEGSFSMEFHQIKWCIAQMILLAGPGVLLSTFCLGSVLKLTFPYNWSWKISLLLGGLLSATDPVAVVALLKELGACKKLTTIIEGESMMNDGVAMVVYTLLFRMVLGESFNWVAIIKFLSKASLGAVGIGLAFGMASVPWFGYIFNDIVIEITLTLAVSYVAYFTAQEGVDVSGILTVTTLGMFYSAVERIAFKSDGPGSLHHFWEMVAYISNTLIFILSGVIIAEGVLNGSNVTADGKSWVNLFVLYAYVQASRCIAVGALYPLLSYFGHGLDWKEAVFLVWSGLRGPVSLSLALSVKASIHGLRTKYLWESRCDGESEAIIGGTNLKGQQCLFRGDLDVWLKWDSKTRRMKSNNEEGSWTKDVLYMEAYGLYLIL 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1637 480 Gene3D - 152 202 - -
Lele49g1637 480 MobiDBLite consensus disorder prediction 1 25 - -
Lele49g1637 480 Pfam Sodium/hydrogen exchanger family 34 404 IPR006153 GO:0006812|GO:0015299|GO:0016020|GO:0055085
Lele49g1637 480 MobiDBLite consensus disorder prediction 11 25 - -
Lele49g1637 480 PANTHER SODIUM/HYDROGEN EXCHANGER 14 402 IPR018422 GO:0006812|GO:0015299|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1637 Lele-ChrLele49 18416711 18433932 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1637 26 404 Antiporters AT2G01980 69.657 2.33e-178 529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g1637 49 18416711 18433932 Lele49g1637 49 18416711 18433932 ECH
Lele49g1637 49 18416711 18433932 Lele51g1640 51 17376016 17410131 hybridization
Lele49g1637 49 18416711 18433932 Lele52g1702 52 20561582 20575579 hybridization