Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1632 ATGGGTCTCCCAAAACCACGGGCCTCTGATATCACCTTTGCTTCTGGCTCTCTCCCCAGGCTAAGCATGCCGGAGAAGGCAATGCCGAAGGAGGCGGCGTACCAGAACATTCACGACGAGCTGCAGTTCGACGCCATTCCCAAGCTCAACCTGGCATCCTTCGTCACCACTTCCATGGAGGAAGAATGCAACAAGCTAATCATGGAATCCATTAACAAGAACTACGTTGATATGCACGAGTACCCCATCACCACTGACCTTCACAATCGATGCGTGAACATGCTGGCGAGATTGTTCAATGCTCCGATGGAAGAAGGCGAAAGCGGCGTCGGAGTGGGGACGGTTGGATCCTCGGAAGCCATAATGCTGGCGGGGCTGGCTTTCAAGAAGAGATGGCAAAACATGAGGAAGGCTCAAGGCAAGCCTTTCGACAAGCCTAACATTGTAACAGGCTCCAATGTTCAGGTGTGTTGGGAGAAGTTTGCGAGGTATTTCGAGGTGGAGTTGAAGGAAGTGAAGGTGAGGGAAGGGTACTACGTGATGGATCCGGCGAGAGCGGTGGAGATGGTGGACGAGAACACGATATGTGTGGCGGCGATTCTGGGATCTACTTACAATGGCGAATTTGAAGACGTCAAGCTCTTGAACGATCTCCTTCTACAAAAGAATAAACAAACTGGGTGGGAGACGCCGATTCATGTGGACGCAGCGAGTGGAGGGTTTATAGCTCCATTTTTGTACCCGGAGCTAGAGTGGGATTTCAGGTTGCCATTGGTGAAGAGTATCAATGTGAGTGGCCACAAGTACGGTCTGGTGTATGCAGGCATTGGTTGGGTTCTTTGGAGGACCAAACAAGACTTGCCTCAAGATCTTGTCTTCCACATCAATTACCTCGGAGCTGATCAGCCTACCTTCACCCTCAATTTTTCCAAAGGTTCTAGCCAAATTATTGCCCAGTATTATCAGCTAATTCGCTTGGGCAAAGAGGGCTATCGTAATGTGATGGAGAACTGTAGAGAAAATGCAATGGTTCTAAAGGAAGGAATAGTGAACACTGGATGCTTCAACATACATTCCAAGGACGATGGCGTTCCTGTGGTGGCATTCTCGCTCAAGGACAGAAGCCGGCACGACGAGTTCAAGATCTCCGCCATGCTCCGCCGCAACGGGTGGATTGTGCCGGCATACCCGATGCCACCAGGTGCCGAGCACATCAAGGTGCTGCGTGTTGTGATAAGGGCCGAGTTCTCTCGCACCCTAGCTGAACACCTCGTGCAGGACATCACAAAAGTGTTGAATGAACTTGAAATGCTTCCTGAATACAAGTCCAATGTCGAACAAGGTATTGTTACTAGCAACGTTGTTAATGTGAAGAATGATCAGAATAGTGATAATATTGAAGGAGTGATGAAGAGGACTGCGTTGGATGTCCAGAGAGAAATCATCGATCAAGAAGCTAACAAGCGCCAAAAAATCTTGGCAGTCTAG 1488 0.494 MGLPKPRASDITFASGSLPRLSMPEKAMPKEAAYQNIHDELQFDAIPKLNLASFVTTSMEEECNKLIMESINKNYVDMHEYPITTDLHNRCVNMLARLFNAPMEEGESGVGVGTVGSSEAIMLAGLAFKKRWQNMRKAQGKPFDKPNIVTGSNVQVCWEKFARYFEVELKEVKVREGYYVMDPARAVEMVDENTICVAAILGSTYNGEFEDVKLLNDLLLQKNKQTGWETPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVLWRTKQDLPQDLVFHINYLGADQPTFTLNFSKGSSQIIAQYYQLIRLGKEGYRNVMENCRENAMVLKEGIVNTGCFNIHSKDDGVPVVAFSLKDRSRHDEFKISAMLRRNGWIVPAYPMPPGAEHIKVLRVVIRAEFSRTLAEHLVQDITKVLNELEMLPEYKSNVEQGIVTSNVVNVKNDQNSDNIEGVMKRTALDVQREIIDQEANKRQKILAV 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1632 495 SUPERFAMILY PLP-dependent transferases 12 435 IPR015424 -
Lele49g1632 495 FunFam Glutamate decarboxylase 352 439 - -
Lele49g1632 495 Gene3D - 352 439 - -
Lele49g1632 495 Gene3D - 10 56 - -
Lele49g1632 495 Gene3D - 57 350 IPR015421 GO:0003824
Lele49g1632 495 FunFam Glutamate decarboxylase 57 351 - -
Lele49g1632 495 Pfam Pyridoxal-dependent decarboxylase conserved domain 24 372 IPR002129 GO:0016830|GO:0019752|GO:0030170
Lele49g1632 495 CDD DOPA_deC_like 50 430 - -
Lele49g1632 495 PANTHER GLUTAMATE DECARBOXYLASE 14 488 IPR010107 GO:0004351|GO:0006536|GO:0030170
Lele49g1632 495 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 15 436 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1632 Lele-ChrLele49 18352481 18355155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1632 12 482 Calmodulin-binding Proteins AT5G17330 76.000 0.0 745