Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1616 ATGTTTGCCTCTTTTTGGGAATTATCAAAGGATCAGGATGATGGGGAATGGAAGTTTCTGTTGGAAGCATCCAAAATGTCACGGAAAGGCTTGATGGAACAGGATCTGAGTAAACTGGATGTAACAAAATTGCATCCACTTTCTCCTGAAGTCATATCTCGGCAGGCTACCATTAATATTGGTATTTTTGAATGGAATTGTAATCATGTCCTGCTAGGCACCATTGGCCATGTAGCTCATGGCAAGTCAACAGTTGTTAAAGCAATATCAGGTGTTCAGACTGTTCGATTTAAAAATGAGTTGGAGCGTAACATTACAATTAAGCTTGGATATGCGAATGCAAAGATATACAAGTGTGAAGATGAACGGTGTCCCAGGCCCATGTGCTACAAGGCATATGGAAGTGGAAAAGAAGACAGTCCTATGTGTGACGTGCCTGAATTTGAAAACTGCAGGATGAAATTGTTAAGACATGTTTCTTTCGTAGATTGCCCGGGCCATGATATTCTTATGGCTACCATGCTTAATGGAGCAGCAATCATGGATGGAGCTTTATTACTTATTGCTGCAAATGAGGGTTGTCCACAACCACAAACCTCTGAGCACCTGGCTGCTGTGGAAATTATGCGCTTACAACACATAATAATTCTTCAGAATAAGGTTGATCTGATTCAGGAAAATGTGGCTATCAATCAGCATGAAGCGATTCAGAAGTTTATACAAGGAACTGTTGCTGATGGTGCACCTGTAGTCCCAATTTCAGCCCAGCTAAAGTATAATATAGATGTTGTTTGTGAGTACATTGTGAAAAAGATCCCAATTCCAGAAAGAAACTTTGTCTCTCCACCTAATATGATTGTGATCCGATCTTTTGATGTCAATAAACCTGGGTTTGAAGTTGATGATATTAAAGGAGGCGTAGCTGGTGGAAGCATTCTTAGGGGTGTTTTGAAGGTAAACCAATTCATTGAAGTCCGACCTGGAATAGTTGTCAAGGACGAGAGCGGGAATATAAGATGCACACCCATATACTCTAGAATAGTTTCATTATACGCTGAACAAAATGAGCTTCAATTTGCTGTGCCAGGAGGTCTAATTGGTGTTGGCACAACCATGGATCCCACATTGACGCGTGCTGACAGATTGGTGGGGCAAGTTCTTGGAGAGGTTGGATCACTGCCTGAGGTTTATGTTGAACTTGAGGTGAACTTCTTCTTGCTTCGAAGGCTCCTTGGTGTCCGGACAAAAGGATCTGAGAGACAAGGAAAGGTATCCAAGCTTACCAAAGCAGAGATCCTAATGTTGAACATTGGATCAATGTCAACAGGGGCTAGAGTTGTTGCAGTGAAGAATGATTTGGCAAAGTTGCAACTGACTTCCCCAGTGTGCACCAGTAAGGGGGAGAAGATTGCTCTGAGTAGGCGTGTCGAGAAGCATTGGCGTCTGATTGGGTGGGGCCAAATCCAAGCAGGAACCACTCTTGATATACCAGGTGCTCCTGTTCTGAGTTAA 1512 0.4272 MFASFWELSKDQDDGEWKFLLEASKMSRKGLMEQDLSKLDVTKLHPLSPEVISRQATINIGIFEWNCNHVLLGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDERCPRPMCYKAYGSGKEDSPMCDVPEFENCRMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANEGCPQPQTSEHLAAVEIMRLQHIIILQNKVDLIQENVAINQHEAIQKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFVSPPNMIVIRSFDVNKPGFEVDDIKGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIRCTPIYSRIVSLYAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVYVELEVNFFLLRRLLGVRTKGSERQGKVSKLTKAEILMLNIGSMSTGARVVAVKNDLAKLQLTSPVCTSKGEKIALSRRVEKHWRLIGWGQIQAGTTLDIPGAPVLS 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1616 503 Pfam Initiation factor eIF2 gamma, C terminal 399 488 IPR015256 -
Lele49g1616 503 Gene3D Translation factors 394 493 - -
Lele49g1616 503 PRINTS GTP-binding elongation factor signature 71 84 IPR000795 GO:0003924|GO:0005525
Lele49g1616 503 PRINTS GTP-binding elongation factor signature 176 187 IPR000795 GO:0003924|GO:0005525
Lele49g1616 503 PRINTS GTP-binding elongation factor signature 160 170 IPR000795 GO:0003924|GO:0005525
Lele49g1616 503 PRINTS GTP-binding elongation factor signature 214 223 IPR000795 GO:0003924|GO:0005525
Lele49g1616 503 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 FAMILY MEMBER 26 495 - -
Lele49g1616 503 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 67 276 IPR000795 GO:0003924|GO:0005525
Lele49g1616 503 FunFam Eukaryotic translation initiation factor 2 subunit gamma 394 493 - -
Lele49g1616 503 CDD eIF2_gamma_III 394 488 IPR015256 -
Lele49g1616 503 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 392 489 IPR009001 -
Lele49g1616 503 FunFam Eukaryotic translation initiation factor 2 subunit gamma 67 277 - -
Lele49g1616 503 Gene3D - 68 277 IPR027417 -
Lele49g1616 503 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 279 IPR027417 -
Lele49g1616 503 FunFam Eukaryotic translation initiation factor 2 subunit gamma 278 393 - -
Lele49g1616 503 Gene3D Translation factors 279 393 - -
Lele49g1616 503 CDD eIF2_gamma 70 277 IPR044128 GO:0005525
Lele49g1616 503 Pfam Elongation factor Tu GTP binding domain 68 273 IPR000795 GO:0003924|GO:0005525
Lele49g1616 503 CDD eIF2_gamma_II 278 391 IPR044127 GO:0000049
Lele49g1616 503 Pfam Elongation factor Tu domain 2 305 387 IPR004161 GO:0005525
Lele49g1616 503 SUPERFAMILY Translation proteins 277 391 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1616 Lele-ChrLele49 18091787 18096854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1616 26 500 Eukaryotic Initiation Factors Gene Family AT1G04170 88.235 0.0 863