Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1615 ATGAGCGACGTTGACTACTACAAGATACTTCAAGTGTCACGTAAAGCGAACGACGATGAGTTGAAGAAGGCGTACAAAAAACTGGCCATGAAATATCACCCAGATAAGAATAATCAAAGCCCCGTAAAGATGAAAGAAGCAGAGGCAAAATTCAAAGAGATATCTGAGGCTTACGAGGTTCTCGTTAACCCTACGAAGCGAAAGAGTTATGATGATGGCCTAACAAGTCCTCTGAATAATAATAATAATATGACCAGTTCTGATACTACTACTAGTAGGAAGCGAAAAACCTGTGATTTTGGTGGTTCTCAGTATCCTCTTAACTTCGAAAGGGTTGTTCTGAAGAATCCTGATGAACATATTGCAGTTCATAAGGCCAAAGACATGAAATCCGTAGCATCAGAACACAAACTGGTTTTAAGTCTTGAGGATCTTTACAAAGGATGCGAAAGAAGATTGAGAATCTCAAGGAGTGCTATTAATTCTCTCGGAAACATGACGATTATTGATGAACTATTGGAGATAAACGTGAAGCCTGGTTGGAAGAAAGACACAAAGATAAGATTTCCAGGAAAAGGAAACCAAGTACCAGGAAGTTGTTGTCCTGCTGATATGGTATTTGTGGTGGAAGAGAAGCCTCATAAGATTTTCAAAAGGGAAGGAAATGACTTGGTGACCACTCAAAAGATATCACTTTTAGAGGCTCTAACAGGAAAAACAATCAATGTTACAACGTTGGATGGAAGAGAAATCGAAGCTTCTGTCACAGATATTGTGAAACCAGACACTGAGATTGGGATCCAAGACGAAGGCATGCCCTCGTCAAGTGAACCAGGGAAAAAAGGAAACCTCAGAATTAAGTTTGATATCATCTTTCCATCATCACAGCTTACTGAATCACAAAAGTCTGAACTTAAAAAGCTTTTTAGTGAAGTCCATGATTAA 945 0.3905 MSDVDYYKILQVSRKANDDELKKAYKKLAMKYHPDKNNQSPVKMKEAEAKFKEISEAYEVLVNPTKRKSYDDGLTSPLNNNNNMTSSDTTTSRKRKTCDFGGSQYPLNFERVVLKNPDEHIAVHKAKDMKSVASEHKLVLSLEDLYKGCERRLRISRSAINSLGNMTIIDELLEINVKPGWKKDTKIRFPGKGNQVPGSCCPADMVFVVEEKPHKIFKREGNDLVTTQKISLLEALTGKTINVTTLDGREIEASVTDIVKPDTEIGIQDEGMPSSSEPGKKGNLRIKFDIIFPSSQLTESQKSELKKLFSEVHD 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1615 314 ProSiteProfiles dnaJ domain profile. 5 74 IPR001623 -
Lele49g1615 314 Pfam DnaJ C terminal domain 135 293 IPR002939 -
Lele49g1615 314 PRINTS DnaJ domain signature 7 25 IPR001623 -
Lele49g1615 314 PRINTS DnaJ domain signature 46 66 IPR001623 -
Lele49g1615 314 PRINTS DnaJ domain signature 25 40 IPR001623 -
Lele49g1615 314 CDD DnaJ 5 61 IPR001623 -
Lele49g1615 314 FunFam DnaJ subfamily B member 13 214 294 - -
Lele49g1615 314 Gene3D DnaJ domain 2 118 IPR036869 -
Lele49g1615 314 MobiDBLite consensus disorder prediction 71 91 - -
Lele49g1615 314 CDD DnaJ_C 135 295 - -
Lele49g1615 314 SMART dnaj_3 4 66 IPR001623 -
Lele49g1615 314 Pfam DnaJ domain 5 71 IPR001623 -
Lele49g1615 314 ProSitePatterns Nt-dnaJ domain signature. 51 70 IPR018253 -
Lele49g1615 314 SUPERFAMILY Chaperone J-domain 1 83 IPR036869 -
Lele49g1615 314 SUPERFAMILY HSP40/DnaJ peptide-binding domain 217 295 IPR008971 GO:0006457|GO:0051082
Lele49g1615 314 MobiDBLite consensus disorder prediction 71 97 - -
Lele49g1615 314 FunFam Dnaj homolog subfamily b member 130 212 - -
Lele49g1615 314 Gene3D - 133 212 - -
Lele49g1615 314 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 308 - -
Lele49g1615 314 Gene3D - 213 314 - -
Lele49g1615 314 SUPERFAMILY HSP40/DnaJ peptide-binding domain 135 215 IPR008971 GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1615 Lele-ChrLele49 18074266 18075987 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1615 6 71 C2H2 Transcription Factor Family AT1G74250 38.806 1.23e-09 57.4