Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1604 ATGAAACAGAGACGGCGGTCGTGGCGCAACAAGATTCGGATCGTGAAGTCTGGAGCTTTACCAGTGTTATTGAATCTCCTTCAATGCCAAAGACAATCACTGATAGAACTAACAATAGCTGCTATGCTAACTCTTTCTTCTTGCAAATCAAATAAGCTACCAATAGCTTCATCTGAGGCTATTCAATTACTGATACAAATTCTCAATGGCAATTATGAACATTGCGTAAACACTCAATCCCAGCTTGACGCCAAAGCCACACTCCATAACATCTCAACCTGTAAAGAGATAACACCATTGCTAGTCTCTTCTGGTATAAGAATTGTGGATGGAACACAGATTGCTAAAGGGATGGCTAGAGAATTATTGCTGCTTCTGAGGGATTGCTCTAATTATGGTTCAACAAGTGGGAAGAAGATGAATCATGTGATAATAGAACGGATAATGAAGGAGACTGATGAAGAAGGTGAGGAATTGGCTGGGAGTACTTTGAGATTTGTGGAGGAGATGATTGCCAAGCTCCATACATGA 531 0.4087 MKQRRRSWRNKIRIVKSGALPVLLNLLQCQRQSLIELTIAAMLTLSSCKSNKLPIASSEAIQLLIQILNGNYEHCVNTQSQLDAKATLHNISTCKEITPLLVSSGIRIVDGTQIAKGMARELLLLLRDCSNYGSTSGKKMNHVIIERIMKETDEEGEELAGSTLRFVEEMIAKLHT 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1604 176 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 7 105 - -
Lele49g1604 176 SUPERFAMILY ARM repeat 9 106 IPR016024 -
Lele49g1604 176 Pfam Armadillo/beta-catenin-like repeat 10 36 IPR000225 GO:0005515
Lele49g1604 176 Gene3D - 5 156 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1604 Lele-ChrLele49 17780636 17781970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1604 5 164 U-box Gene Family AT3G46510 28.235 5.58e-09 52.8