Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1569 ATGGAAGGCGGGAATATCGACATGAAGTGCACAAAAAGGCGGCGAAGAGACTCATCGGTTGCGCTTTTACAGGGAAGTGAGAAACAAGAGCAACCACCACAGGGTGGTCAATCAACTACTGTCAAGAGAAGTTCAAGGTTTCGTGGAGTTAGCAGACATAGATGGACAGGGAGATATGAAGCTCATTTATGGGACAAAGGGACTTGGAATCCAACTCAAAAGAAGAAAGGGAAGCAAGTAGTGGTTGTTCTTTATGCTCATCTTGATTTCTCACATCATGTTCATTTCTTTGTGTTTTTGTCTGACAAATTTGGATTCGCTGGTTGGTATGGATCAGTATATTTGGGAGCTTATGCTGATGAAGAAGCTGCTGCTAGAGCATATGATTTGGCTGCACTCAAGTACTGGGGAACTTCTACCTTCACAAACTTCCCTGTATCTAATTATGAGAACGAGATTGAGATAATGAAAAACATGACAAAAGAAGAATATCTTGCTTCATTAAGAAGAAGAAGCACTGGATTTTCCAGAGGGGTATCAAAGTACAGAGGAGTTGCAAGGCACCATCACAATGGAAGATGGGAAGCAAGAATAGGGAGAGTTTTTGGTAACAAGTACCTCTACCTTGGCACTTACTGTACCCAAGAAGAGGCAGCTCGTGCATATGATATAGCAGCTATAGAATACAGAGGCTTGAATGCAGTGACAAACTTTGACTTGAGTACATATATTAGATGGCTAAGACCAGAAGCCCTTAATACTACTTCTCAAGAACAAAAGCAAAACCCAGAATTTCACCATCTCATTACCAACCCTAACCTCACCCAAACCTGCAGAGAAATCACTGAGATCCCCAGTTCTAGTGTATCAAAAGGTGATTATGAATGTGTTTGTTTAAATATGTCCAAAAAGTTATCTGAAACTTATCAATTGTTTCTACACCAGGTACCTAATTCCAATCCCAGTACAAAAGAGCAAGATATACCTCAGTATTCAACCCCTTTATGTCATAGTAGTAGGGCCAAGTCATCATCTTCTCCAACAGCATTAGGGCTTCTGCTGAAATCCTCAATGTACAGAGAGCTAATGCAGAAAAATATAAATCATGGAAAAGGTGAAGAAGAAGAAAACCCACAAGAAGGAAGTAATCGGTTTCCTTACTTATTCTCTTCCAATGGTAATAGAATACCAAATTTACAGTTACCAGAAGAGAAAGCAGTGCCAGCACAGTATCATAGAACTGAGCAATCTGTATGGAATGAGTGCTTTCAAAGAATCTGA 1281 0.4012 MEGGNIDMKCTKRRRRDSSVALLQGSEKQEQPPQGGQSTTVKRSSRFRGVSRHRWTGRYEAHLWDKGTWNPTQKKKGKQVVVVLYAHLDFSHHVHFFVFLSDKFGFAGWYGSVYLGAYADEEAAARAYDLAALKYWGTSTFTNFPVSNYENEIEIMKNMTKEEYLASLRRRSTGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYCTQEEAARAYDIAAIEYRGLNAVTNFDLSTYIRWLRPEALNTTSQEQKQNPEFHHLITNPNLTQTCREITEIPSSSVSKGDYECVCLNMSKKLSETYQLFLHQVPNSNPSTKEQDIPQYSTPLCHSSRAKSSSSPTALGLLLKSSMYRELMQKNINHGKGEEEENPQEGSNRFPYLFSSNGNRIPNLQLPEEKAVPAQYHRTEQSVWNECFQRI 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1569 426 ProSiteProfiles AP2/ERF domain profile. 181 239 IPR001471 GO:0003700|GO:0006355
Lele49g1569 426 MobiDBLite consensus disorder prediction 370 389 - -
Lele49g1569 426 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 31 319 - -
Lele49g1569 426 SUPERFAMILY DNA-binding domain 112 147 IPR016177 GO:0003677
Lele49g1569 426 FunFam AP2-like ethylene-responsive transcription factor 180 241 - -
Lele49g1569 426 ProSiteProfiles AP2/ERF domain profile. 46 145 IPR001471 GO:0003700|GO:0006355
Lele49g1569 426 MobiDBLite consensus disorder prediction 1 49 - -
Lele49g1569 426 SMART rav1_2 181 245 IPR001471 GO:0003700|GO:0006355
Lele49g1569 426 SMART rav1_2 46 151 IPR001471 GO:0003700|GO:0006355
Lele49g1569 426 CDD AP2 180 241 IPR001471 GO:0003700|GO:0006355
Lele49g1569 426 MobiDBLite consensus disorder prediction 1 21 - -
Lele49g1569 426 MobiDBLite consensus disorder prediction 22 45 - -
Lele49g1569 426 Gene3D AP2/ERF domain 180 241 IPR036955 GO:0003700|GO:0006355
Lele49g1569 426 SUPERFAMILY DNA-binding domain 180 241 IPR016177 GO:0003677
Lele49g1569 426 Pfam AP2 domain 180 231 IPR001471 GO:0003700|GO:0006355
Lele49g1569 426 Gene3D AP2/ERF domain 45 147 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1569 Lele-ChrLele49 16197526 16201279 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1569 42 275 AP2-EREBP Transcription Factor Family AT5G57390 52.016 9.27e-78 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele49g1569 AP2 5.2e-11 CL0081