Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1561 ATGTCTTCCAGAAGATCATCCTCCTCCCGTTCCCGACAATCCGGTGCTTCCTCTGATATCACTGAAGCTCAGATCAACGACCTTGTCTCCAAGTTACAACAACTCATCCCTGAGCTTCGAGCTCCACGACGTCGTTCCGACAAGGTTTCTGCTTCAAAGGTCTTACAGGAGACTTGTAACTACATCAAGAGCTTGCACAGAGAAGTTGATGATCTGAGTGAAAGACTGTCTGAGCTCTTGGCAAACACTGACTCCAACAGTGCTCAAGCCGCCATTATTAGGAGCCTTCTTATGTAA 297 0.4747 MSSRRSSSSRSRQSGASSDITEAQINDLVSKLQQLIPELRAPRRRSDKVSASKVLQETCNYIKSLHREVDDLSERLSELLANTDSNSAQAAIIRSLLM 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1561 98 FunFam Transcription factor ILI6 10 94 - -
Lele49g1561 98 Coils Coil 62 82 - -
Lele49g1561 98 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 9 65 IPR011598 GO:0046983
Lele49g1561 98 CDD bHLH_AtPRE_like 20 82 - -
Lele49g1561 98 PANTHER TRANSCRIPTION FACTOR PRE 1 98 IPR044293 GO:0006355|GO:0040008|GO:0046983
Lele49g1561 98 Pfam Helix-loop-helix DNA-binding domain 24 66 IPR011598 GO:0046983
Lele49g1561 98 MobiDBLite consensus disorder prediction 1 20 - -
Lele49g1561 98 Gene3D - 22 94 IPR036638 GO:0046983
Lele49g1561 98 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 24 87 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1561 Lele-ChrLele49 13729313 13730209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1561 20 97 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G74500 76.923 2.26e-35 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele49g1561 HLH 4.2e-07 No_clan