Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1560 ATGAATTCGAGTCCGAATTACAGTAACAGTAACGGCTATCATAGCCAGCAGCAGCAGCTGGGAATGAGTCGCAGAGAGCGAGTACGACGTGGAAGTCGGAGGTCACGAGATTCCAGAGACGGCGCAAGTAGCCTTAGGGTTTGCGAACCGCAGCAGCAGCAGCAACAACAACTAGACAGACCTCCTTGTACGGACTTCGACATGGCCTATTTCCATTCTTATGCTCATGTTGGTATCCATGAGGAGATGATCAAGGATCGGGTGCGGACTGAAACTTACAGATCAGCTATCACACAATTCCAGAGTTATATTGCAGGAAAAGTTGTTGTGGACGTTGGATGTGGCACTGGCATCCTTTCTATATTTTGTGCTCAAGCTGGTGCAAAGCGGGTGTATGCAATTGATGCTAGTGACATTGCGTTGCAGGCAAATGAAGTAGTGAAAGCAAATAATCTATCTGATATTGTCATTGTATTGCATGGACGGGTTGAGGATGTTGAAATAGATGAAGAGGTTGATGTCATAATCTCTGAATGGATGGGATATATGCTTCTATATGAGAGCATGCTTGGAAGTGTTATCACAGCTAGGGATCGCTGGCTCAAACCTGGAGGTCTTATTCTTCCTTCAGATGCGAAGCTGTACGTGGCTCCTGTAACTCATGCTGACCGATACAGTGAAAGCATTGACTTCTGGCGTAATATCTATGGAATTGATATGTCTGCCATGTTACCTTTAGCTAAACAATGTGCATTTGAAGAACCTTCTGTGGAAACAATAACGGGTGAAAATGTTTTGACATGGCCGCATCTGGTAATACATGTTGACTGTTATTCGGTTACCATCCAAGAGCTAGAATCTGTTTCAACTCGATATAAATTCAAGTCAATGATGCGAGCTCCACTGCATGGGTTTGCATTTTGGTTTGATGTTGAATTTAATGGGCCCACAACAACACCAGCGAATTCTTATTTTACAAATTTGTCTGTTGACAACCATCCTGTGGATGGAAGTCACCGAAAGAAACGGACGAATCCCAGCGATGCATTGGTCCTGTCCACTGCACCCGAGGACCCTCCAACCCATTGGCAACAGACGTTGATATACTTCTATGATCCCATAGAACTAGAACAAGATCAAGTTATTGAAGGCTCGGTGGTGCTGTCTCAAAGCAAAGAAAATCGTCGATTTATGAATATTCACCTAGAATATTCCTCAGGTGGTCGTTCCTATGTGAAAGAATCTGTTATGAGATGA 1257 0.4391 MNSSPNYSNSNGYHSQQQQLGMSRRERVRRGSRRSRDSRDGASSLRVCEPQQQQQQQLDRPPCTDFDMAYFHSYAHVGIHEEMIKDRVRTETYRSAITQFQSYIAGKVVVDVGCGTGILSIFCAQAGAKRVYAIDASDIALQANEVVKANNLSDIVIVLHGRVEDVEIDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKPGGLILPSDAKLYVAPVTHADRYSESIDFWRNIYGIDMSAMLPLAKQCAFEEPSVETITGENVLTWPHLVIHVDCYSVTIQELESVSTRYKFKSMMRAPLHGFAFWFDVEFNGPTTTPANSYFTNLSVDNHPVDGSHRKKRTNPSDALVLSTAPEDPPTHWQQTLIYFYDPIELEQDQVIEGSVVLSQSKENRRFMNIHLEYSSGGRSYVKESVMR 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1560 418 MobiDBLite consensus disorder prediction 1 62 - -
Lele49g1560 418 Gene3D - 211 417 - -
Lele49g1560 418 FunFam Protein arginine N-methyltransferase 6 63 209 - -
Lele49g1560 418 Pfam Ribosomal protein L11 methyltransferase (PrmA) 105 179 - -
Lele49g1560 418 MobiDBLite consensus disorder prediction 1 22 - -
Lele49g1560 418 FunFam Protein arginine N-methyltransferase 6 211 416 - -
Lele49g1560 418 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 67 418 IPR025799 GO:0016274|GO:0018216
Lele49g1560 418 Gene3D Vaccinia Virus protein VP39 64 209 IPR029063 -
Lele49g1560 418 MobiDBLite consensus disorder prediction 45 61 - -
Lele49g1560 418 CDD AdoMet_MTases 109 208 - -
Lele49g1560 418 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 34 406 IPR025799 GO:0016274|GO:0018216
Lele49g1560 418 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 73 408 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1560 Lele-ChrLele49 13646607 13715156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1560 70 385 C2H2 Transcription Factor Family AT3G12270 38.369 6.44e-64 214