Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1543 ATGTGTAGGGAATGGATTTCTTGGCTGTTGAGCTATTTTGACATTGGAGGATGGAGACCCACTTGCAATAATGGTGCGTTGATCATTCCCCACTGGTTAGAGATTCAAATTGTTCTTCTCTTTGCTTTGGAAGAAACTGATCATTTTGCTCTTGTCCTAATGGCCAAGAGACACATTTTCTTCTTTCGTTTATTTACAATTTTGTTCTTCAGTTTCCCGCCATGTATGTCCGTAAGGATAGAAACAGAGGCTCTTCTTCAGTTCAAGAAGCATTTGAAGGACCCTTTGGATTCTTTGGCTTCCTGGGCAGATTCAGAGTCTCCCTGTGAATTCAACGGAGTTACTTGTGATAGATTTTCTGGGAAAGTCGTAGAAGTTTCGCTGGAAAATAAGTCCCTTTCTGGGGAGATTTTCCCATCAATTTTTGCTCTGCAGAACCTTCGAGTTCTGTCACTCGCATCAAATTTTATTTCTGGGAAGCTTCCATTTGAAGTAACCAACTGCAGCGACCTTAGAGTTTTGAACTTAACAGAAAATGAGATGGTTGGGATTTTGCCGGACTTGTCTATGATGACAAATCTCAAAGTTCTTGACTTTTCTGCAAACTACTTTTCCGGCAGATTCCCAAGCTGGGTCGGAAATCTGACTGGTCTAGTTTCGCTAGGGCTCGGAGAAAATGAATATATTGAGAGTGAAATTCCTGAGACTCTTGCAAATCTGAAGAACTTGACTTGGCTCTATCTTGGTGGTTCTCATTTGAGTGGGGAGATTCCAGAATCAATTTATGAAATGAACGCTTTGGAGACACTGGATATTTCCAGAAACATGATCTCTGGGAAACTCTCCAAGTCAATTTGGAAGTTGGAAAATCTTTGTAAGATTGAGCTTTTCTCAAATAATTTAACTGGGCAAATCCCAGCTGAGTTGGCAAACTTGACCAAGCTTGAGGAGATTGACATTTCGATGAACCATATGTATGGTAAATTGCCAGAGGTCATTGGTACTATGAAGAATTTGGTTGTTTTTCAACTCTATGAAAACAACTTTTCGGGAGAAATTCCTTCTGGGTTTGGAGATATGCAACATCTTGTTGGATTCTCAATTTATCGAAACAGCTTCTTTGGGAAAATTCCTGAAAATTTCGGCCGTTTCTCACCACTGGACAGCATTGATATATCAGAGAATCAATTTTCAGGTGATTTTCCAAAGTTCTTGTGTGAAAACAGAAATTTAAAATTTTTGCTTGCTTTGCAAAATAATTTCTCCGGTGCATTTCCTGAGACTTATGTTACATGTAAATCATTGGAGAGAGTTAGGGTGAGCAGAAATCGCTTGTCTGGAAAAATTCCAAATGAGCTGTGGGCACTTCCATTTGTAAAGATAATCGATTTGGCTGACAATAATTTTGATGGTAATATATCTCCAAAAATTGGGCTTTCTTCTAGCTTAAGCCAGTTAGTTCTAACAAAGAACAAGTTTTCGGGTAAGCTTCCTTCACAACTTGGTAAGCTGATGAATTTGGAGAAGTTATATTTGAGCAACAACAATTTCTATGGTGAAATACCAGCTGAAATTGGAGCTCTGAAGCAATTATCCTCTTTTCATCTAGAAGAGAATTCATTAACTGGATCAATACCTGCAGAACTTGGCAATTGTGCAAGGCTAGTGGACCTGAATCTCGCTCGGAATTTTCTAACCGGCGCTATCCCTCAGTCAGTTTCACTCATGAGCTCAGTGAACTCTCTTAATCTATCTGGCAACAAACTTACAGGATCAATCCCAGAAAGTTTAGTGTCAATGAAATTGAGCTCAATTGATTTTTCCGAAAATCAGTTGTCTGGGAGAATTCCGAGCAATCTTCTAATTATTGGTGGTGATGTAGCTTTTGTTGGAAACCCAGGACTTTGTGTTGAACAAAATTCAAGAACTCTTGTGAATTCTGAATTCAACATTTGTACAAGCATACATGGTCAGAAAAGGGTCTTCTCTGATAATATAGTAATTTTCTGTGTCATTGCTTCTGTCTTGGTCATCGTGTTGGCCGTGTTGCTTGTGAGTTACGGAAGCTTCCGGCATGATAAAGCAGACTTGGAGAAAAACTTGCAAGATAAAAAGGAAACAGATTCAAAATGGAAAATTGCTTCTTTCCACCAAGTTGATCTTGATGTGAATGAAATATGTAATTTGAATGAAGATAATTTGATCGGAACTGGCGGTACCGGAAAGGTATATCGAGTTGACTTGAAGGAAAATGGTTCCACCGTGGCCGTAAAACAACTATGGAAAGGAGATGGTGTGAAAATTTTGGCAGCAGAGATGGAGACTTTGGGAAAAATCAGGCATAGAAATGTACTTAAGCTTTATGCTTGTTTGTTTAAAGGAGGATCAAACTATTTAGTGTTAGAGTACATGGCAAATGGTAATCTTTTTCAAGCTCTTCACAGACAGATAAAGGGTGGGAAACCAGAATTGGATTGGTACCAGAGATATAAAATTGCACTGGGAACTGCGAAAGGAATTGCATATTTACATCATGATTGTTCTCCACCTATCATTCACAGAGACATAAAATCTAGTAACATTTTGCTCGACGAGGATTACGAGGCAAAAATTGCTGATTTCGGGGTCGCAAAATTCGCAGAGAAAACTGATCAACAGCTGGGTTTTAGCTGTCTTGCTGGTACTCATGGTTATATTGCTCCTGAGCTTGCTTATACACGCCAAGTCACTGAAAAGAGTGATGTGTATAGTTTTGGAGTGGTGTTGCTAGAATTACTTACAGGAAGGGAACCCATTGAAGAGGATTACGGTGAAGGGAAGGATATTGTATATTGGGTTATGACTAACCTCGATGACCGTGAAAGCGCGATCAAGATCCTCGATGATAAGATAGCATCGGAGTCAGTTGAAGACGAAATGATTAAGGTCTTGAAGGTTGCCATCCACTGCACAACTAAGCTCCCTTCTCTGCGCCCTACTATGAGAGATGTTGTCAAGATGCTTATTGATGCTTATTCTAGCCCTTTTCAATCCCCAGACAGCGATTTTGAGAAAGAAGTTAAGGATTTTATCTAG 3075 0.3945 MCREWISWLLSYFDIGGWRPTCNNGALIIPHWLEIQIVLLFALEETDHFALVLMAKRHIFFFRLFTILFFSFPPCMSVRIETEALLQFKKHLKDPLDSLASWADSESPCEFNGVTCDRFSGKVVEVSLENKSLSGEIFPSIFALQNLRVLSLASNFISGKLPFEVTNCSDLRVLNLTENEMVGILPDLSMMTNLKVLDFSANYFSGRFPSWVGNLTGLVSLGLGENEYIESEIPETLANLKNLTWLYLGGSHLSGEIPESIYEMNALETLDISRNMISGKLSKSIWKLENLCKIELFSNNLTGQIPAELANLTKLEEIDISMNHMYGKLPEVIGTMKNLVVFQLYENNFSGEIPSGFGDMQHLVGFSIYRNSFFGKIPENFGRFSPLDSIDISENQFSGDFPKFLCENRNLKFLLALQNNFSGAFPETYVTCKSLERVRVSRNRLSGKIPNELWALPFVKIIDLADNNFDGNISPKIGLSSSLSQLVLTKNKFSGKLPSQLGKLMNLEKLYLSNNNFYGEIPAEIGALKQLSSFHLEENSLTGSIPAELGNCARLVDLNLARNFLTGAIPQSVSLMSSVNSLNLSGNKLTGSIPESLVSMKLSSIDFSENQLSGRIPSNLLIIGGDVAFVGNPGLCVEQNSRTLVNSEFNICTSIHGQKRVFSDNIVIFCVIASVLVIVLAVLLVSYGSFRHDKADLEKNLQDKKETDSKWKIASFHQVDLDVNEICNLNEDNLIGTGGTGKVYRVDLKENGSTVAVKQLWKGDGVKILAAEMETLGKIRHRNVLKLYACLFKGGSNYLVLEYMANGNLFQALHRQIKGGKPELDWYQRYKIALGTAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEAKIADFGVAKFAEKTDQQLGFSCLAGTHGYIAPELAYTRQVTEKSDVYSFGVVLLELLTGREPIEEDYGEGKDIVYWVMTNLDDRESAIKILDDKIASESVEDEMIKVLKVAIHCTTKLPSLRPTMRDVVKMLIDAYSSPFQSPDSDFEKEVKDFI 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1543 1024 Gene3D Transferase(Phosphotransferase) domain 1 804 1018 - -
Lele49g1543 1024 ProSitePatterns Protein kinases ATP-binding region signature. 735 758 IPR017441 GO:0005524
Lele49g1543 1024 SMART serkin_6 729 1006 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g1543 1024 Pfam Leucine rich repeat N-terminal domain 81 117 IPR013210 -
Lele49g1543 1024 FunFam Probable inactive receptor kinase RLK902 78 232 - -
Lele49g1543 1024 FunFam leucine-rich repeat receptor-like protein kinase TDR 804 1012 - -
Lele49g1543 1024 ProSitePatterns Serine/Threonine protein kinases active-site signature. 851 863 IPR008271 GO:0004672|GO:0006468
Lele49g1543 1024 Pfam Protein kinase domain 731 999 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g1543 1024 Pfam Leucine rich repeat 192 253 IPR001611 GO:0005515
Lele49g1543 1024 CDD STKc_IRAK 735 1001 - -
Lele49g1543 1024 FunFam Leucine-rich repeat receptor protein kinase EMS1 257 340 - -
Lele49g1543 1024 ProSiteProfiles Protein kinase domain profile. 729 1010 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g1543 1024 SUPERFAMILY RNI-like 305 618 - -
Lele49g1543 1024 FunFam Receptor-like protein kinase HSL1 341 645 - -
Lele49g1543 1024 Gene3D Phosphorylase Kinase; domain 1 712 803 - -
Lele49g1543 1024 Gene3D Ribonuclease Inhibitor 77 228 IPR032675 -
Lele49g1543 1024 SUPERFAMILY L domain-like 107 414 - -
Lele49g1543 1024 Gene3D Ribonuclease Inhibitor 229 289 IPR032675 -
Lele49g1543 1024 Gene3D Ribonuclease Inhibitor 290 361 IPR032675 -
Lele49g1543 1024 Gene3D Ribonuclease Inhibitor 362 646 IPR032675 -
Lele49g1543 1024 FunFam Leucine-rich receptor-like protein kinase family protein 719 803 - -
Lele49g1543 1024 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 265 1002 - -
Lele49g1543 1024 SUPERFAMILY Protein kinase-like (PK-like) 726 1001 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1543 Lele-ChrLele49 12955556 12959690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1543 66 1014 Receptor kinase-like Gene Family AT1G72180 57.411 0.0 1079
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele49g1543 Pkinase 5.3e-49 CL0016