Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1538 ATGGCAACTCCATCGGAACAACCGGTTCCCACCTCTAGTGAAGCCATAAGCAAAAATGGGATTCCCATAATCGTGAATCTGATTGTTTCAACATGTTACGTTATTGGTTTACGGAATTTCTATTGTAGTGATTCTACAAAGAAGTCGCAAAACTGTGTCTTAGGTTTTGTGGTACCTACAATGGAGAAAAGGGGGAATGTTCTGATGCAGAAGTATGAGTTTGGAAGCTTATTAGGTCAAGGGAATTTTGCAAAGGTTTACCATGCAAAGGACCTTAGAACTGGTGAAAATGTTGCCATTAAGATGATTGATAAGGAGAGGATTATGAAAGCTGGGCTAGTTGATCAAAGAAAGCTGGGCTAG 363 0.4022 MATPSEQPVPTSSEAISKNGIPIIVNLIVSTCYVIGLRNFYCSDSTKKSQNCVLGFVVPTMEKRGNVLMQKYEFGSLLGQGNFAKVYHAKDLRTGENVAIKMIDKERIMKAGLVDQRKLG 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1538 120 ProSiteProfiles Protein kinase domain profile. 72 120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g1538 120 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 66 111 - -
Lele49g1538 120 Gene3D Phosphorylase Kinase; domain 1 68 119 - -
Lele49g1538 120 SUPERFAMILY Protein kinase-like (PK-like) 64 108 IPR011009 -
Lele49g1538 120 ProSitePatterns Protein kinases ATP-binding region signature. 78 110 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1538 Lele-ChrLele49 12792264 12793218 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1538 61 118 CBL-interacting serine-threonine protein kinases AT5G01810 65.517 4.70e-21 84.7