Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1537 ATGGAAGATATGAAGCTGAGGCAACATCGACAAGACAAGGAAGAATCAAAGAAGGAGCGCCATATTGTCTCTTGGACTCAAGAGGAGGATGATATACTTAGAGAGCAAATTAGCATTCATGGAACAGACAAGTGGTACGCATACTTAAATTCTGATTTCAAGAAAGGAGGTTGGTCACCGGAGGAAGATATGCTATTATGTGAGGCTCAGAAGATATTTGGCAACGGATGGACAGAAATAGCTAAGGTGGTTTCAGGCAGGGCCCACATCCCTGATGCTGCCGCAAGGATCACCTACGGAGACAGACCACATAAACAATTTGGAACACCAGTAATTAGCCAGCAACCCAGAGTGCCATTTGCAGTATTATCTAATTTCAAGGATAACAACTTGCTAGACCAAACTCCTGTTTGCAATGCAAGTTCAACAATTACGGTAATGTCCTTGAAGTAA 453 0.4283 MEDMKLRQHRQDKEESKKERHIVSWTQEEDDILREQISIHGTDKWYAYLNSDFKKGGWSPEEDMLLCEAQKIFGNGWTEIAKVVSGRAHIPDAAARITYGDRPHKQFGTPVISQQPRVPFAVLSNFKDNNLLDQTPVCNASSTITVMSLK 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1537 150 Pfam Myb-like DNA-binding domain 55 87 IPR001005 -
Lele49g1537 150 SUPERFAMILY Homeodomain-like 21 89 IPR009057 -
Lele49g1537 150 CDD SANT 24 45 IPR001005 -
Lele49g1537 150 Gene3D - 12 53 - -
Lele49g1537 150 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 50 87 IPR017930 -
Lele49g1537 150 MobiDBLite consensus disorder prediction 1 21 - -
Lele49g1537 150 ProSiteProfiles Myb-like domain profile. 50 87 IPR001005 -
Lele49g1537 150 PANTHER MYB PROTEIN-RELATED 24 88 - -
Lele49g1537 150 Gene3D - 54 97 - -
Lele49g1537 150 CDD SANT 58 87 IPR001005 -
Lele49g1537 150 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 45 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1537 Lele-ChrLele49 12782511 12785672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1537 17 127 MYB Transcription Factor Family AT2G02820 49.231 5.77e-36 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele49g1537 Myb_DNA-binding 1.3e-06 CL0123