Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1533 ATGGCTTCCGAACCCGATGTGTCAGAGATTTCGGCAATGTTCGAAAGGATGTTGAGAAACAGAGACCTGTCTCTGTTTCTCCCCTTTATCTTTGGCTTATCAAATGCTGCTTCGAGAAGAGAGGGTGAAGACTCAGGTGAGGAAAATGAGAGTGAAGAAAGTCCCCAACGCGAGAGAATCATCTTGATCAACCCCTTCACACAGGGTATGGTGGTGATCGATGGTGCTTCAAGCCTCGAGGCTCTGATTCGTGGTTTGGGTAGTGGCAAGGGTGGGCGGCCCCCAGCTTCCAAAGAATCCATAGATGCTTTGCCAAGTGTTAAAATAGAGGAAGGTGATGAGGGAGAGTGTGTGATTTGCTTGGAGGAGTGGGAAGCTGGAGGGGAAGTGAAAGAGATGCCTTGTAAGCATAAATTTCATCCCAATTGTGTACAGAAGTGGTTGGGGATTCATGGTTCTTGCCCAGTTTGCAGGTATGAAATGCCTACTGATGAAGAAATTGGGAAGAAGAGAGATGAAGAAGACGGGGAAGAGAGGAGGAGAAGGATAGGGAGAGAAGTTTGGGTTAGTTTCTCTTTAAATGCTGAAGGAAGAAGAAGTGAGAACTCAAATCAAACTCCTTCAGATGATTCCAATAATTCTTCATCAAGTCCAAGGGGTGATTCCAATGATTCTTCATTAAATCCAAGAGGTGATGCTGAGGAGGTAGATAGTTAG 717 0.4561 MASEPDVSEISAMFERMLRNRDLSLFLPFIFGLSNAASRREGEDSGEENESEESPQRERIILINPFTQGMVVIDGASSLEALIRGLGSGKGGRPPASKESIDALPSVKIEEGDEGECVICLEEWEAGGEVKEMPCKHKFHPNCVQKWLGIHGSCPVCRYEMPTDEEIGKKRDEEDGEERRRRIGREVWVSFSLNAEGRRSENSNQTPSDDSNNSSSSPRGDSNDSSLNPRGDAEEVDS 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1533 238 MobiDBLite consensus disorder prediction 38 58 - -
Lele49g1533 238 FunFam E3 ubiquitin-protein ligase RNF181 87 164 - -
Lele49g1533 238 SMART ring_2 117 157 IPR001841 -
Lele49g1533 238 CDD RING-H2_PA-TM-RING 116 158 - -
Lele49g1533 238 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 49 162 - -
Lele49g1533 238 Pfam Ring finger domain 116 158 IPR001841 -
Lele49g1533 238 ProSiteProfiles Zinc finger RING-type profile. 117 158 IPR001841 -
Lele49g1533 238 SUPERFAMILY RING/U-box 107 164 - -
Lele49g1533 238 MobiDBLite consensus disorder prediction 193 238 - -
Lele49g1533 238 MobiDBLite consensus disorder prediction 195 227 - -
Lele49g1533 238 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 88 164 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1533 Lele-ChrLele49 12546635 12547351 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1533 1 199 C3H Transcription Factor Family AT1G26800 53.922 1.13e-67 206