Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1525 ATGGACTTTATCCCCGTCGCCGTAACCACCCAAACCATTTATTCATATAACCCGACCAGACCCGTCAACGGCTCTCCTCAATTTTCGTCCATTGTGGTTTCTTCAATCTACAAGGAATGTCTTAAGAACCACGCGGCTAGCATCGGCGGCCACGCGCTTGACGGCTGCGGAGAGTTTATGCCGTCGCTTTCTTCCAACAACGCCGACCCGCGCTCCCTAAAATGCGCCGCCTGCGGTTGCCACCGGAACTTCCACCGCTGTGACCCAAAACAAGAGCAGCCCCAGTTCCTCAACTGCTTCTACTCGCCGGCGCTACCTTACAGGAATTTCAGCCCCAGCACGAGTCTGAGCACGAGCCCGATGTCAAGCCCTTCGCCGCCTCCGCTGTCGCATTTCCCACCGCCGCCGTCTTCCTTCCGCTCAGTGGGAGTAGCAGTCCCCCATATGCTCTTAGCACTAGGAACCACCTCCTCGGGACCGTCGGAGGAGGAGCACCGGAGCTTCAATTCTCGAGCGCCGGCCAAGGCGGCGAAAGAAAACCCGAGTGGAAAAAAGCGGTATAGAACCAAGTTCAGTCCAGAACAGAAGCAGAAGATGTACGAGTTTTCTGAGAAATTGGGTTGGAAAATGCAGAACGCAGACGATGAGTTGGTTCAGGGATTCTACAACGAGATTGGCGTTTCAAGAGTGGTTTTCAAGGTGTGGATGCACAATCATAAGAACACATACAGGAATAAGAGATCAGAATCTGAGAATAACAACAATAATACTGAGAAAGTGACTGAAGACGAAAATAACAGTAACAATGGTGGTGGCGGTAGGGGTGGGTTTGATAGTGATATCGACAAGAATCCAGTCGTAAAAAGCATTGATCTTCATGCTTCTTCTGTTAATGGCTCGTCTTCTTCTTGA 912 0.5121 MDFIPVAVTTQTIYSYNPTRPVNGSPQFSSIVVSSIYKECLKNHAASIGGHALDGCGEFMPSLSSNNADPRSLKCAACGCHRNFHRCDPKQEQPQFLNCFYSPALPYRNFSPSTSLSTSPMSSPSPPPLSHFPPPPSSFRSVGVAVPHMLLALGTTSSGPSEEEHRSFNSRAPAKAAKENPSGKKRYRTKFSPEQKQKMYEFSEKLGWKMQNADDELVQGFYNEIGVSRVVFKVWMHNHKNTYRNKRSESENNNNNTEKVTEDENNSNNGGGGRGGFDSDIDKNPVVKSIDLHASSVNGSSSS 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1525 303 MobiDBLite consensus disorder prediction 155 195 - -
Lele49g1525 303 SUPERFAMILY Homeodomain-like 178 244 IPR009057 -
Lele49g1525 303 MobiDBLite consensus disorder prediction 243 258 - -
Lele49g1525 303 MobiDBLite consensus disorder prediction 113 134 - -
Lele49g1525 303 MobiDBLite consensus disorder prediction 243 303 - -
Lele49g1525 303 Pfam ZF-HD protein dimerisation region 36 87 IPR006456 -
Lele49g1525 303 MobiDBLite consensus disorder prediction 164 195 - -
Lele49g1525 303 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 33 242 - -
Lele49g1525 303 MobiDBLite consensus disorder prediction 259 273 - -
Lele49g1525 303 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 184 241 IPR006455 -
Lele49g1525 303 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 37 88 IPR006456 -
Lele49g1525 303 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 37 87 IPR006456 -
Lele49g1525 303 Gene3D - 169 246 - -
Lele49g1525 303 Coils Coil 240 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1525 Lele-ChrLele49 12021700 12022611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1525 37 247 ZF-HD Transcription Factor Family AT1G69600 45.755 7.91e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Lele49g1525 ZF-HD_dimer 8.1e-27 No_clan