Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1522 ATGGCTCCCAAAAGAGGTGGAAAGGCTCCAATTGCAGCTGCTAAGAAGAAACAGGACAAGGTTGTCAACCTGCTATTTGAGAAGCGGCCAAAGCAGTTTGGGATTGGAGGGGCATTGCCTCCTAAGAGAGACCTGACCCGATTTGTGAAGAGGCCCATGACTATGGAAATTCCCTACTGCATTGTGAAGGGCAAGGCACGCTTGGGATTGATTGTGCATAAGAAAACTGCATCAGTTCTGTGCTTAACCACTGTCAAGAATGAAGACAAGTTAGAATTCTCTAAGATTCTAGAGGCTACCAAGGTGATTTTATATACTGTTTCTTTGCTGTCTGTTCACATGTCAAAAAAATTAATGGGCCTTGTTATTTTGTGTACTCCGTTTGCAGCCACCTTGAATGACAAGTATGATGAATACAGGAAGAAGTGGGGTGGTGGCATTATGGGTTCTAAATCCCAAGCCAGAACCAAGGCCAAGGAAAGGCTCCTTGACAAGGAAGCAGCTCAGAGAATGTCTTAA 519 0.4451 MAPKRGGKAPIAAAKKKQDKVVNLLFEKRPKQFGIGGALPPKRDLTRFVKRPMTMEIPYCIVKGKARLGLIVHKKTASVLCLTTVKNEDKLEFSKILEATKVILYTVSLLSVHMSKKLMGLVILCTPFAATLNDKYDEYRKKWGGGIMGSKSQARTKAKERLLDKEAAQRMS 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1522 172 MobiDBLite consensus disorder prediction 150 172 - -
Lele49g1522 172 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 54 91 IPR004038 -
Lele49g1522 172 Gene3D - 108 166 IPR029064 -
Lele49g1522 172 MobiDBLite consensus disorder prediction 154 172 - -
Lele49g1522 172 Gene3D - 52 107 IPR029064 -
Lele49g1522 172 SUPERFAMILY L30e-like 54 100 IPR029064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1522 Lele-ChrLele49 11786445 11788195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1522 19 57 Cytoplasmic Ribosomal Protein Gene Family AT2G47610 64.103 1.45e-12 62.0