Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1517 ATGGGTAGGTCACCTTGCTGTGAGAAAGTGGGGTTGAAGAAAGGGCCATGGACTCCTGAAGAAGACCAGAAGCTCGTCGCTTACATTGAACAACATGGCCATGGAAGCTGGCGTGCTTTGCCTGCCAAAGCTGGACTTGAGAGATGTGGGAAAAGTTGCAGACTGAGATGGACTAATTATCTCAGACCTGATATTAAAAGAGGAAAGTTCAGCTTGCAAGAAGAGAGAACCATTATTCAACTTCATGCTCTTCTTGGAAACAGATGGTCAGCGATAGCGGCTCACTTGCCTAAGAGAACAGACAATGAGATCAAGAATTACTGGAACACTCATCTCAAGAAGAGGCTCGCCAGAATGGGAATCGACCCGGCCACGCACCGGCCTAAAGTTGACGCCGGTGGAGGCCTGGCTAGCTCGAGCCTCAGCCACATGGCTCAGTGGGAGAGTGCCCGGCTAGAAGCTGAAGCCAGGCTGGTTAGAGAGTCCAAGCTCCAGCTCGGCCCAGCGTTTTTCCCATCGGGCAAACCGGCTCGGCTCGTCCTCAACAGAATCTCGGCTCGCCAGTCCGGTCCGCCATGCCTAGACGTCCTCAAAGCATGGCAAAACTCATGGTCGTTGCCGGCGGCAGCACAAGACAAAAATACCAGAATGCATAACATGTACGCCTTGATGCTCGCCGCAGCTGACGACGACCTCGAGTCGCCAACCTCCACTTTGAGCTTCCCGGAACCCATACCACCTAGTTCCACCAACACCACCACCGTAGGAATATTACCCAATGAAAAACTCATCATCCCTCCAACAACCACCACCACCACGGTTAGTTCCGTCACCGCACCCACTTCAGGAATCGATCCATGGGGGTGTTTGCCGGAGGGGAACCAGGACTCGGCGGAGATCATTGGAGAAAGAACAAATTTACAAGACGACGACATTATGGTGGCGGTGGAGGCATTTATGGGAGAAAGGTACAAGAACGTACAAGTGAATTTACAAGAAATACTGTCATCAAACGGTATAATAGAGGGTTTAAACCGCGAAGATAATCACGATGATGTGCCTATTTTCGAATCCAATGAGAACATGAACAACTCGGGGTTCGTGGATATTAATGGCGAAGGAAACATGATTTGTTCAACTTCAAACACAACCTTCGAGGAGAAGAATCATTACTGGAACAGCATATGTAGTACCCTAACATGGTAA 1206 0.5 MGRSPCCEKVGLKKGPWTPEEDQKLVAYIEQHGHGSWRALPAKAGLERCGKSCRLRWTNYLRPDIKRGKFSLQEERTIIQLHALLGNRWSAIAAHLPKRTDNEIKNYWNTHLKKRLARMGIDPATHRPKVDAGGGLASSSLSHMAQWESARLEAEARLVRESKLQLGPAFFPSGKPARLVLNRISARQSGPPCLDVLKAWQNSWSLPAAAQDKNTRMHNMYALMLAAADDDLESPTSTLSFPEPIPPSSTNTTTVGILPNEKLIIPPTTTTTTVSSVTAPTSGIDPWGCLPEGNQDSAEIIGERTNLQDDDIMVAVEAFMGERYKNVQVNLQEILSSNGIIEGLNREDNHDDVPIFESNENMNNSGFVDINGEGNMICSTSNTTFEEKNHYWNSICSTLTW 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1517 401 FunFam MYB transcription factor 69 116 - -
Lele49g1517 401 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele49g1517 401 FunFam MYB-related transcription factor 13 66 - -
Lele49g1517 401 SMART sant 66 114 IPR001005 -
Lele49g1517 401 SMART sant 13 63 IPR001005 -
Lele49g1517 401 Gene3D - 13 66 - -
Lele49g1517 401 Gene3D - 69 116 - -
Lele49g1517 401 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele49g1517 401 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Lele49g1517 401 CDD SANT 16 61 IPR001005 -
Lele49g1517 401 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele49g1517 401 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele49g1517 401 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 211 - -
Lele49g1517 401 MobiDBLite consensus disorder prediction 234 253 - -
Lele49g1517 401 CDD SANT 69 112 IPR001005 -
Lele49g1517 401 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Lele49g1517 401 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1517 Lele-ChrLele49 11671888 11674309 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1517 1 245 MYB Transcription Factor Family AT3G01140 62.000 1.37e-99 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele49g1517 Myb_DNA-binding 3.5e-15 CL0123