Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1516 ATGGTAATGTGTAGGTCATCAAGCTGTGAGAAGAAGGTGGGGTTGAAGAAAGGACCATGGACTCCTGAAGAAGACCACAAGCTTGTCTCTTACATTCAGCAACATGGCTATGGAAGCTGGCATGCTTTGCCTTTCAAAGCTGGGCTTGAGAGATGTGGGAGGAGTTGCAGACTAAGGTGGACGAATTACCTAAGACCTGATATCAAACGAGGAAAGTTTAGCTTGCAAGAAGAGAGAACCATTATTCAACTTCATGCTTTTATCGGAAACAAGTCTGCTTTTACTCTTCTTCTTCTTCTTCTTCCACGTTTTAAATTTATGCTAAGCTCATCATCAGGGGTTAGAACAGACAATGAGATCAAGAACTACTGGAACACTCATCTCAAGAAGAGGCTCGCTAGAATGGGAATCGACCCGGTCACACACCGCCTGAAAGTTGACGCCGGCAGAGGCTCGGCTACCTTCAGCCTTAGTCACATGGCTCAGTGGGAAAGTGCCCGGGTTGAAGCCGAAGCCAGGCTGTTTATAGATGTACCTACTGCATTGGATTAA 552 0.4601 MVMCRSSSCEKKVGLKKGPWTPEEDHKLVSYIQQHGYGSWHALPFKAGLERCGRSCRLRWTNYLRPDIKRGKFSLQEERTIIQLHAFIGNKSAFTLLLLLLPRFKFMLSSSSGVRTDNEIKNYWNTHLKKRLARMGIDPVTHRLKVDAGRGSATFSLSHMAQWESARVEAEARLFIDVPTALD 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1516 183 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 3 174 - -
Lele49g1516 183 ProSiteProfiles Myb-like domain profile. 65 128 IPR001005 -
Lele49g1516 183 ProSiteProfiles Myb-like domain profile. 12 64 IPR001005 -
Lele49g1516 183 CDD SANT 19 64 IPR001005 -
Lele49g1516 183 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 132 IPR017930 -
Lele49g1516 183 SMART sant 69 130 IPR001005 -
Lele49g1516 183 SMART sant 16 66 IPR001005 -
Lele49g1516 183 Gene3D - 14 70 - -
Lele49g1516 183 SUPERFAMILY Homeodomain-like 18 91 IPR009057 -
Lele49g1516 183 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 68 IPR017930 -
Lele49g1516 183 FunFam MYB-related transcription factor 16 69 - -
Lele49g1516 183 Pfam Myb-like DNA-binding domain 17 64 IPR001005 -
Lele49g1516 183 Pfam Myb-like DNA-binding domain 70 128 IPR001005 -
Lele49g1516 183 Gene3D - 72 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1516 Lele-ChrLele49 11644642 11647103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1516 3 174 MYB Transcription Factor Family AT3G01140 63.842 1.20e-76 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele49g1516 Myb_DNA-binding 2.4e-05 CL0123