Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1511 ATGGCTTCTTCCATTTTCTCTGTACTTCAAGGCTCTGCTTTTCTTTCTCCTTCTATATCCCACAAAACCAGCTCCTTCACCTTTCCGATCACACCCAAAGCCCCACTTGTTCACCTCAGAAAACCTCTCTCCGCCAAATCTCTAGCTTCTGTCGAAAGTGATACATCGTTGTCGCCGGTGATTCGGACATTCTGGCAGTGGCTATGGGAAGAAGGGGTCATCTCTTCAAAGACGCCAGTGGAGCCCGGAGTGGTGACGGAAGGCCTCGGACTTATTGCCAGGAGAGACATTTCGCGAAACGAGGTCGTTTTGCAGGTGCCCAAGAGATTATGGATTAACCCCGATGCGGTGGCGGCTTCGGAGATTGGGAACGTGTGTAGCGGATTGAAGCCTTGGGTATCGGTTGCTCTGTTCTTGATTAGAGAGCGGTCGAGGGATGAGTCTGTTTGGAAGCATTACTTCAAAATTCTCCCAGAGGTCACTGATTCGACAATATATTGGTGGGTTTTTGTTTGTTTTTCTGTATCGTGCAGGTCAGAGGAGGAGCTCTCTGAGCTTCAAGGTACTCAACTTCTGAATACAACACTAGCTGTGAAAGAATACGTGCAGAGTGAGTTTCTAAAACTGGAAGAAGAAATCATACTCCCTAATAAGAAGCTTTTCCCTTCTTCGATCACACTGGATGACTTCTTCTGGGCATTTGGAATTCTCAGATCAAGAGCTTTCTCTCGTCTTCGCAATGAAAATCTAGTGGTGATACCGCTTGCAGACTTGATAAACCATAGTGCCAGAGTAACAACAGAAGATCATGCTTATGAGATTAAAGGAGCAGCAGGTCTTTTCTCTTGGGATTACCTGTTTTCTCTGAGGAGCCCTCTTTCTGTCAAGGCCGGGGAGCAGATATTTATTCAATATGATTTGAAGAAAAGCAATGCAGAGTTGGCTCTAGACTACGGCTTCATTGAACCAAATTCAAACAGGAATGCGTATACGCTGACGCTACAAATATCCGAAGCAGACCCTTTTTTTGGTGACAAACTAGACATAGCTGAGTCCAATGGTTATGGTGAGACTGCATATTTCGACGTCTTCTATGACCAACCACTTCCGTCAGGACTGCTTCCATATCTGCGTCTGGTGGCACTTGGTGGCACCGATGCTTTCTTGTTAGAATCTATATTCAGAAACGCCATTTGGGGTCATCTTGAGTTGCCTGTAAGCCGTGACAATGAGGAGCTAATATGTGGAGTTGTTCAAGACGCCTGCAAATCTGCCCTTGTTGGTTATCATACTACCATTGAAGAGGATGAGAAGTTAAAAGAGGAAAAGCTAGATTACAGGCTGGCAATTGCAGTGGGAATAAGAGAAGGAGAAAAGAAGTTGCTGCAACAGATTGAAGGGATCTTCAAGGAGAAAGAGTTGGGGTTGGATGAGCTAGAATATTATCAAGAAAGGAGGCTCAAGGATCTCGGTCTTTGTGGAGAAAGTGGTGAGATCCTTGGGGATCTCAGCAAGTTCATGTAA 1524 0.4541 MASSIFSVLQGSAFLSPSISHKTSSFTFPITPKAPLVHLRKPLSAKSLASVESDTSLSPVIRTFWQWLWEEGVISSKTPVEPGVVTEGLGLIARRDISRNEVVLQVPKRLWINPDAVAASEIGNVCSGLKPWVSVALFLIRERSRDESVWKHYFKILPEVTDSTIYWWVFVCFSVSCRSEEELSELQGTQLLNTTLAVKEYVQSEFLKLEEEIILPNKKLFPSSITLDDFFWAFGILRSRAFSRLRNENLVVIPLADLINHSARVTTEDHAYEIKGAAGLFSWDYLFSLRSPLSVKAGEQIFIQYDLKKSNAELALDYGFIEPNSNRNAYTLTLQISEADPFFGDKLDIAESNGYGETAYFDVFYDQPLPSGLLPYLRLVALGGTDAFLLESIFRNAIWGHLELPVSRDNEELICGVVQDACKSALVGYHTTIEEDEKLKEEKLDYRLAIAVGIREGEKKLLQQIEGIFKEKELGLDELEYYQERRLKDLGLCGESGEILGDLSKFM 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1511 507 ProSiteProfiles SET domain profile. 71 306 IPR001214 GO:0005515
Lele49g1511 507 Gene3D - 322 486 IPR036464 -
Lele49g1511 507 FunFam Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 57 320 - -
Lele49g1511 507 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 60 453 - -
Lele49g1511 507 ProSiteProfiles Plant LSMT protein-lysine methyltransferase family profile. 3 505 IPR011192 GO:0009507|GO:0030785
Lele49g1511 507 CDD SET_RBCMT 80 321 IPR044431 GO:0016279|GO:0018022
Lele49g1511 507 SMART set_7 78 312 IPR001214 GO:0005515
Lele49g1511 507 Gene3D set domain protein methyltransferase, domain 1 58 321 - -
Lele49g1511 507 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 329 500 IPR036464 -
Lele49g1511 507 Pfam Rubisco LSMT substrate-binding 338 462 IPR015353 -
Lele49g1511 507 FunFam Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 322 486 - -
Lele49g1511 507 Pfam SET domain 88 305 IPR001214 GO:0005515
Lele49g1511 507 PIRSF RMT_SET 1 506 IPR011192 GO:0009507|GO:0030785
Lele49g1511 507 SUPERFAMILY SET domain 58 328 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1511 Lele-ChrLele49 11536731 11542359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1511 61 261 NAC Transcription Factor Family AT3G56570 25.714 2.96e-06 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele49g1511 SET 1.3e-09 No_clan