Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1502 ATGGAAGACACAGACAACAAGCCCAATGCTAACAAGAAGTTCATAACAAAAAGAAGCAGCTTCAGAGGCGGAACCAACCCTCATGAACATCTTCATCATCATCATCACTATCATCAGCATCAGCTACTACAACAATACTCGACTCAGTTTGGGTTCTGTTACCAGAACGAGTATCAGAGGCACTACCCGGCTCTTCTTCCTCTACCTTCTATTCTACCTCTGCAACTAGCTTTGACGCCATCGTTCACTCAAGACCAGACCGTCAAAACGAAAACCCATTCGCAGAAGTCTCCATGCAAGCTGAATAATTCTCCGTTTGCTGCCTCATCTTATAACAAAGTCTCAGTAGACAACACGGTTGCTCATGCTCCCAAGGAGTATCAGCAGCAAGCCAAGGCATCCCTTCAAGGAGATGACGGGAAGAAACTCATACCTGCAAGAAAACCACAGCCACTAGTTGCCGCAAGGAGGCCAGACTCCGGTGGCAAAGAGGGCTCTGCAATCTCTCTCCTTGCCAACCACTTCCTAGTGAAGTTTGATTCATCACAAAAAATATACCATTACAATGTTGAAATTACTCCCAATCCCTCCAAGCAAGTTGCCCGAGTAATCAAAGAGAAGTTTGTTAATAATAATTCTTCTGTACTTTCTGGTGCTGTTCCAGCATATGATGGGCAGAAGAATCTTTACAGCTCTGTTGAATTCCAAAATGATAAGCTTGAGTTCTACTTAAGCCTGCCAATCCCAGCAAGCAAGAGCTCATACCCACCTGATAGAGAAATGTGTGACATGAAAGAGAGGCATGGACAGCTTAAACTGTTCAGAGTAAACATAAAACTAGTCTCTAAGATCAATGGGAAGGAGTTGGCAAAATACTTGAGCAAAGAGGAAGATGATTGGATTCCACTTCCGCAGGATTATCTCCATGCTTTGGATGTAGTTCTGAGGGAGAGTCCAACTGAGAAGTGTATTCCTGCTGGAAGATCCTTCTATTCAACTTCAATGGGAAGAACCAAAGAGATTGGTGGAGGAGCTGCTGGGTTGAGAGGGTTCTTTCAGAGTCTTAGACCAACTCAACAAGGACTTGCCCTCAATGTTGATTTTTCTGTAACTGCTTTCCATGAAAGCATAGGAGTGATTCCATACTTGCAGAAGCGTCTCGAGTTCCTTCGAGATCTTTCTCAAAGGAAGACAGCAAGTTTAAAAGGTGAAGAGAGGAAAGAAGTGGAGAGGGCCTTGAAGAACATCAGGGTCTTCGTTTGTCATAGAGAAACTGTTCAGAGATATCGTGTCTATGGCTTAACTAAGGAGGCTACTGAGAATCTTTCGTTTATCGACAGGGATGGAAAGAATCTGAGGCTCGTTAGCTATTTTAAAGACCACTATAACTATGACATACAATTTAGTAAATTGCCATGCTTGCAAATTAGTAGGAGTAAACCATGTTATCTTCCTATGGAGCTTTGTGTCATCTGTGAAGGCCAGAAGTTCCTTGGAAAGCTTTCTGATGATCAGACTGCAAAAATACTTAAGATGGGCTGCCAAAGACCAAGAGAACGAAAAGCCATAATTGAAGGAGTCATGAGGGGGCCTGTTGGGCCAACTAGTGGAAACCAGGAAAGAGAATTCAACCTCCAAGTGTCAAGAGAAATGACTCGTTTATCTGGGAGAATTCTCCATCCTCCCAAGCTAAAGCTTGGAAATGGAGGCAATGTGACGAAGCTAGTTCCTTCGCGGCATGACCGCCAGTGGAACCTTCTAGATGGTCATGTCTTCGAGGGAACTAAGGTTGAACGGTGGACGTTAATAGGCTTTGGTGGTACACCTGAACAGAAATCCAATGTCCCTAGATTTATAAGCCAGCTATCTCAAAGGTGTGAAGAAATGGGCATTTTTCTGAACAAGAGCACAATTGTTAGTCCCCATTTTGAATCAGCCCAGGTGCTTAATAATGTCTCCCTCCTTGAATCTAAGCTCGAGAAAATCCAGAGAAGCGCCTCAAACAATCTGCAGCTTCTTATTTGTGTTATGGAGAGAAAACACAAAGGGTATGCAGACTTGAAAAGAATTGCAGAAACAAGTATTGGGGTTGTGAGCCAATGCTGCTTGTATCCAAATCTCAGTAAATTAAGTTCACAATTTTTGGCAAATTTGGCTCTCAAGATCAATGCCAAAGTTGGTGGATGCACTGTTTCCCTGTACAATTCACTCCCATCTCAGATTCCAAGACTCTTTAAGTATGATGAACCGACTATTTTCATGGGTTCTGATGTAACTCATCCTCATCCACTTGATGATCATAGTCCTTCGGTTGCCGCCGTTGTTGGTAGCATGAATTGGCCTTCTGCGAATAAATATATTTCGAGAATAAGGTCGCAAACGCACCGACAAGAAATCATCCAGGATCTAGGTGCAATGGTGAAGGAGTTACTAGATGATTTCTATCAGGAGGTAAAGAAACTCCCTGGGAGAATAATTTTCTTTAGAGATGGGGTTAGTGAAACCCAATTCTATAGAGTTCTTCAAGATGAACTTCAATCCATCAAAGGGGCATGTTCTAGATTCCCCGGTTATAAACCATTCATTACTTTTGCAGTAGTACAGAAGAGGCATCACACAAGGTTGTTTCCCTTTGAAACTGATAATTGTTATGAGAATATTCCACCGGGGACTGTGGTAGACTCTGTGATCACTCATCCGAAGGAGTTCGATTTCTATCTTTGTAGCCATTGGGGCATGAAAGGAACAAGCAGGCCAACTCGTTACCATGTTTTGTGGGATGAAAACAAGTTTACTTCTGATGAACTCCAGAAGCTGGTTTACAACTTATGCTTTACTTTTGTTAGTTGCACCAAGCCAATTTCTTTGGTTCCTCCTGCTTATTATGCCCATTTAGCTGCATACAGAGGAAGACTCTACCTTGACCGGACAGATTCCTCTGCTTTATCTAAGGGCATCTCTTCGTTATCTAGAGCTGCGCCTCCAAACACAGCACCTCTTCCAAAACTTACTGAGAACATCAAGAAGCTCATGTTCTACTGCTAA 3045 0.4289 MEDTDNKPNANKKFITKRSSFRGGTNPHEHLHHHHHYHQHQLLQQYSTQFGFCYQNEYQRHYPALLPLPSILPLQLALTPSFTQDQTVKTKTHSQKSPCKLNNSPFAASSYNKVSVDNTVAHAPKEYQQQAKASLQGDDGKKLIPARKPQPLVAARRPDSGGKEGSAISLLANHFLVKFDSSQKIYHYNVEITPNPSKQVARVIKEKFVNNNSSVLSGAVPAYDGQKNLYSSVEFQNDKLEFYLSLPIPASKSSYPPDREMCDMKERHGQLKLFRVNIKLVSKINGKELAKYLSKEEDDWIPLPQDYLHALDVVLRESPTEKCIPAGRSFYSTSMGRTKEIGGGAAGLRGFFQSLRPTQQGLALNVDFSVTAFHESIGVIPYLQKRLEFLRDLSQRKTASLKGEERKEVERALKNIRVFVCHRETVQRYRVYGLTKEATENLSFIDRDGKNLRLVSYFKDHYNYDIQFSKLPCLQISRSKPCYLPMELCVICEGQKFLGKLSDDQTAKILKMGCQRPRERKAIIEGVMRGPVGPTSGNQEREFNLQVSREMTRLSGRILHPPKLKLGNGGNVTKLVPSRHDRQWNLLDGHVFEGTKVERWTLIGFGGTPEQKSNVPRFISQLSQRCEEMGIFLNKSTIVSPHFESAQVLNNVSLLESKLEKIQRSASNNLQLLICVMERKHKGYADLKRIAETSIGVVSQCCLYPNLSKLSSQFLANLALKINAKVGGCTVSLYNSLPSQIPRLFKYDEPTIFMGSDVTHPHPLDDHSPSVAAVVGSMNWPSANKYISRIRSQTHRQEIIQDLGAMVKELLDDFYQEVKKLPGRIIFFRDGVSETQFYRVLQDELQSIKGACSRFPGYKPFITFAVVQKRHHTRLFPFETDNCYENIPPGTVVDSVITHPKEFDFYLCSHWGMKGTSRPTRYHVLWDENKFTSDELQKLVYNLCFTFVSCTKPISLVPPAYYAHLAAYRGRLYLDRTDSSALSKGISSLSRAAPPNTAPLPKLTENIKKLMFYC 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1502 1014 ProSiteProfiles PAZ domain profile. 384 493 IPR003100 GO:0005515
Lele49g1502 1014 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 146 977 - -
Lele49g1502 1014 Gene3D - 558 734 - -
Lele49g1502 1014 CDD Piwi_ago-like 541 974 IPR045246 -
Lele49g1502 1014 FunFam Protein argonaute 7 371 497 - -
Lele49g1502 1014 FunFam Argonaute 10 558 734 - -
Lele49g1502 1014 Pfam Argonaute linker 1 domain 326 374 IPR014811 -
Lele49g1502 1014 SMART PAZ_2_a_3 384 524 IPR003100 GO:0005515
Lele49g1502 1014 CDD PAZ_argonaute_like 387 492 - -
Lele49g1502 1014 Pfam Piwi domain 673 971 IPR003165 GO:0003676
Lele49g1502 1014 SUPERFAMILY PAZ domain 371 529 IPR036085 GO:0005515
Lele49g1502 1014 SMART Piwi_a_2 672 975 IPR003165 GO:0003676
Lele49g1502 1014 Gene3D paz domain 370 497 - -
Lele49g1502 1014 SUPERFAMILY Ribonuclease H-like 657 976 IPR012337 -
Lele49g1502 1014 ProSiteProfiles Piwi domain profile. 672 975 IPR003165 GO:0003676
Lele49g1502 1014 Pfam N-terminal domain of argonaute 167 315 IPR032474 -
Lele49g1502 1014 Gene3D - 746 1014 IPR036397 GO:0003676
Lele49g1502 1014 MobiDBLite consensus disorder prediction 1 34 - -
Lele49g1502 1014 SMART DUF1785_2 324 376 IPR014811 -
Lele49g1502 1014 Pfam PAZ domain 387 509 IPR003100 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1502 Lele-ChrLele49 11326751 11330374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1502 162 1014 Eukaryotic Initiation Factors Gene Family AT1G48410 41.275 0.0 637